List of Open Source Software which can be built on Fugaku

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  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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bart 0.6.00

Compiler Fujitsu Compiler 4.4.0a
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> fujitsu-mpi@4.3.1 : has external module in ['lang/tcsds-1.2.30a']
[+] /opt/FJSVxtclanga/tcsds-1.2.30a (external fujitsu-mpi-4.3.1-uzvxr3eqtfulyujbjs4xxt5t3fka76rl)
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/zlib-1.2.11-y27qgb4znlcsleon2lxlxsng52nd4rzj
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/berkeley-db-18.1.40-bcpbh3jxr5snfw5botpbzrncua2jgxtk
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/pkgconf-1.7.3-e7n3ibmo3qglloicw627euk3653lj7dy
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/libiconv-1.16-rveg745oel7pthzqe7iyusrxozpfhzha
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/libbsd-0.10.0-qeelvlo7c4g7yzbkpjjuvkwidjkb63fc
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/xz-5.2.5-nbhstuvzbff45w4irf5d63bwnoaydl5l
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/libffi-3.3-k3dm6wbwvbt66d2dabx3xwi23jhkwf64
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/nasm-2.15.05-zohwcjfspbr2npjcvmwqvnksoapybv4x
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/fftw-3.3.9-x2fokjrtflbap7vijomv62ivfacfwquf
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/libpng-1.6.37-fmmw2vni35sqvdz3dc5pggycx3lgltgp
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/util-linux-uuid-2.36-ph2w2yfbflydnufbyevsnljjmg576a22
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/ncurses-6.2-3cvcdzzqxzuywrbb3fgurgwja7neml6e
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/tar-1.32-4tib3w4bufsp5rmh77dedae6yqrfnztu
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/diffutils-3.7-4tdgwdjkarwx76hsznr273ee5knouaav
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/expat-2.2.10-ziohulkd3v5nlpgoikmhdsuvpwoldk5q
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/libxml2-2.9.10-cxwfsnmjxdlc3yylykvohwacbifuuo4b
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/readline-8.0-x67xwcqnux4xmbj3b7oms47n5fup44e3
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/bzip2-1.0.8-fpw7smnssbalg5kr3ekc2bypkyadczd6
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/sqlite-3.34.0-u7kilxrpewq53ou4yb45ztf5dvzjcko4
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/gdbm-1.18.1-gc7q4o3p6frzkxzisvr2j44kljoktzjm
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/gettext-0.21-7vwvgn6bx6ay6x55ts7wckfucyvtig76
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/freetype-2.10.1-xc72kmxgoafrh5jowizv7ukujvsjos5k
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/perl-5.32.1-zxtqmyvx2crwpk7xxpfk5eu5ntxspszz
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/openblas-0.3.13-e4ymtx6ghs7j536e6swzkv5aq4efghqi
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/openssl-1.1.1j-de77zldhh5cmb3lcdens3lo2j5mypejs
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/python-3.8.8-h5xhvod2elsogcd3cj3ve2tfj6di5352
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/cmake-3.19.5-jp3cfybxfwjhwjodfiuafqkc3t7wj6h3
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/py-setuptools-50.3.2-irb4bsrwqxduixxtdnehgwgg46gtgatg
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/libjpeg-turbo-2.0.6-ejttkzqcd7aaqe2odobzgx5l6iworc5j
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/qhull-2020.1-vxxxybmbxg3orpeft77vsan4lmz2uwli
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/py-cython-0.29.21-abkjb4woka4v3i4qcrcuv2lv4zlmuyui
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/py-setuptools-scm-4.1.2-s64xcsebxaswhexgzb6xh4vtr45nj35o
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/py-six-1.15.0-npkjszsqouj46vxxvxwgbz32iv2vvjzb
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/py-certifi-2020.6.20-b74yipibxycllatoqiakvpf7dnfm72ar
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/py-pyparsing-2.4.7-xcfybeg7h4mqghpfqagkntzij4jq7hq7
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/py-kiwisolver-1.1.0-cbbvkzvueqzje6gmtl6m5syzbr66d4gi
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/py-pillow-7.2.0-wtt32bclpli62vbk6s6gtzvhsrqtxkuv
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/py-numpy-1.20.1-6jeq7klzk3vrf4ft4gjvcyfqiyusyut5
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/py-python-dateutil-2.8.0-xt52hmhnkznwijbej7fjzj4zvxx26mb5
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/py-cycler-0.10.0-zphy7x4jjvjrk2iuntx5dmc3qj2osfsj
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/py-matplotlib-3.3.4-6f2vo6kd7jmonlfyuvt3c5h664o5mqiy
==> Installing bart-0.6.00-w7j77ug5htp4c6zquecvxlyrvahhztch
==> No binary for bart-0.6.00-w7j77ug5htp4c6zquecvxlyrvahhztch found: installing from source
==> Warning: Missing a source id for fujitsu-mpi@4.3.1
==> Warning: Missing a source id for fujitsu-mpi@4.3.1
==> Fetching https://postk-web.r-ccs.riken.jp/spack.mirror/_source-cache/archive/db/dbbd33d1e3ed3324fe21f90a3b62cb51765fe369f21df100b46a32004928f18d.tar.gz
==> Applied patch /vol0001/g9300001/u93001/all-test/fj/spack/var/spack/repos/builtin/packages/bart/Makefile.patch
==> Applied patch /vol0001/g9300001/u93001/all-test/fj/spack/var/spack/repos/builtin/packages/bart/bart_path-0.6.00.patch
==> bart: Executing phase: 'edit'
==> bart: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16'

3 errors found in build log:
21 touch isclean
22 make[2]: Leaving directory '/vol0001/g9300001/u93001/spack-stage/spa
ck-stage-bart-0.6.00-w7j77ug5htp4c6zquecvxlyrvahhztch/spack-src'
23 make[1]: warning: jobserver unavailable: using -j1. Add '+' to pare
nt make rule.
24 /vol0001/g9300001/u93001/all-test/fj/spack/lib/spack/env/fj/fcc -I/u
sr/include/lapacke/ -DNOLAPACKE -MMD -MF /vol0001/g9300001/u93001/sp
ack-stage/spack-stage-bart-0.6.00-w7j77ug5htp4c6zquecvxlyrvahhztch/s
pack-src/src/.bart.d -iquote /vol0001/g9300001/u93001/spack-stage/sp
ack-stage-bart-0.6.00-w7j77ug5htp4c6zquecvxlyrvahhztch/spack-src/src
/ -I/vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8
-a64fx/fj-4.4.0a/fftw-3.3.9-x2fokjrtflbap7vijomv62ivfacfwquf/include
/ -I/vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8
-a64fx/fj-4.4.0a/openblas-0.3.13-e4ymtx6ghs7j536e6swzkv5aq4efghqi/in
clude -DFFTWTHREADS -DMAIN_LIST="avg, bench, bin, bitmask, cabs, cal
dir, calmat, carg, casorati, cc, ccapply, cdf97, circshift, conj, co
nv, copy, cpyphs, creal, crop, delta, ecalib, ecaltwo, estdelay, est
dims, estshift, estvar, extract, fakeksp, fft, fftmod, fftrot, fftsh
ift, filter, flatten, flip, fmac, homodyne, index, invert, itsense,
join, looklocker, lrmatrix, mandelbrot, mip, moba, nlinv, noise, nor
malize, nrmse, nufft, ones, pattern, phantom, pics, pocsense, poisso
n, poly, repmat, reshape, resize, rmfreq, rof, rss, rtnlinv, sake, s
axpy, scale, sdot, show, slice, spow, sqpics, squeeze, ssa, std, svd
, tgv, threshold, toimg, traj, transpose, twixread, upat, var, vec,
version, walsh, wave, wavelet, wavepsf, whiten, window, wshfl, zeros
, zexp, ()" -include src/main.h -O3 -ffast-math -Wmissing-prototypes
-std=gnu11 -fopenmp -c -o /vol0001/g9300001/u93001/spack-stage/spac
k-stage-bart-0.6.00-w7j77ug5htp4c6zquecvxlyrvahhztch/spack-src/src/b
art.o /vol0001/g9300001/u93001/spack-stage/spack-stage-bart-0.6.00-w
7j77ug5htp4c6zquecvxlyrvahhztch/spack-src/src/bart.c
25 /vol0001/g9300001/u93001/all-test/fj/spack/lib/spack/env/fj/fcc -I/u
sr/include/lapacke/ -DNOLAPACKE -MMD -MF src/.show.d -iquote /vol000
1/g9300001/u93001/spack-stage/spack-stage-bart-0.6.00-w7j77ug5htp4c6
zquecvxlyrvahhztch/spack-src/src/ -I/vol0001/g9300001/u93001/all-tes
t/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/fftw-3.3.9-x2fokjrt
flbap7vijomv62ivfacfwquf/include/ -I/vol0001/g9300001/u93001/all-tes
t/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/openblas-0.3.13-e4y
mtx6ghs7j536e6swzkv5aq4efghqi/include -DFFTWTHREADS -DMAIN_LIST="avg
, bench, bin, bitmask, cabs, caldir, calmat, carg, casorati, cc, cca
pply, cdf97, circshift, conj, conv, copy, cpyphs, creal, crop, delta
, ecalib, ecaltwo, estdelay, estdims, estshift, estvar, extract, fak
eksp, fft, fftmod, fftrot, fftshift, filter, flatten, flip, fmac, ho
modyne, index, invert, itsense, join, looklocker, lrmatrix, mandelbr
ot, mip, moba, nlinv, noise, normalize, nrmse, nufft, ones, pattern,
phantom, pics, pocsense, poisson, poly, repmat, reshape, resize, rm
freq, rof, rss, rtnlinv, sake, saxpy, scale, sdot, show, slice, spow
, sqpics, squeeze, ssa, std, svd, tgv, threshold, toimg, traj, trans
pose, twixread, upat, var, vec, version, walsh, wave, wavelet, wavep
sf, whiten, window, wshfl, zeros, zexp, ()" -include src/main.h -O3
-ffast-math -Wmissing-prototypes -std=gnu11 -fopenmp -c -o src/show.
o src/show.c
26 In file included from src/show.c:18:
>> 27 /vol0001/g9300001/u93001/spack-stage/spack-stage-bart-0.6.00-w7j77ug
5htp4c6zquecvxlyrvahhztch/spack-src/src/num/multind.h:19:14: error:
blocks support disabled - compile with -fblocks or pick a deployment
target that supports them
28 typedef void CLOSURE_TYPE(md_nary_fun_t)(void* ptr[]);
29 ^
30 /vol0001/g9300001/u93001/spack-stage/spack-stage-bart-0.6.00-w7j77ug
5htp4c6zquecvxlyrvahhztch/spack-src/src/misc/nested.h:5:26: note: ex
panded from macro 'CLOSURE_TYPE'
31 #define CLOSURE_TYPE(x) (^x)
32 ^
33 In file included from src/show.c:18:
>> 34 /vol0001/g9300001/u93001/spack-stage/spack-stage-bart-0.6.00-w7j77ug
5htp4c6zquecvxlyrvahhztch/spack-src/src/num/multind.h:20:14: error:
blocks support disabled - compile with -fblocks or pick a deployment
target that supports them
35 typedef void CLOSURE_TYPE(md_trafo_fun_t)(long N, long str, void* pt
r);
36 ^
37 /vol0001/g9300001/u93001/spack-stage/spack-stage-bart-0.6.00-w7j77ug
5htp4c6zquecvxlyrvahhztch/spack-src/src/misc/nested.h:5:26: note: ex
panded from macro 'CLOSURE_TYPE'
38 #define CLOSURE_TYPE(x) (^x)
39 ^
40 In file included from src/show.c:18:
>> 41 /vol0001/g9300001/u93001/spack-stage/spack-stage-bart-0.6.00-w7j77ug
5htp4c6zquecvxlyrvahhztch/spack-src/src/num/multind.h:21:14: error:
blocks support disabled - compile with -fblocks or pick a deployment
target that supports them
42 typedef void CLOSURE_TYPE(md_loop_fun_t)(const long* pos);
43 ^
44 /vol0001/g9300001/u93001/spack-stage/spack-stage-bart-0.6.00-w7j77ug
5htp4c6zquecvxlyrvahhztch/spack-src/src/misc/nested.h:5:26: note: ex
panded from macro 'CLOSURE_TYPE'
45 #define CLOSURE_TYPE(x) (^x)
46 ^
47 3 errors generated.

See build log for details:
/home/g9300001/u93001/spack-stage/spack-stage-bart-0.6.00-w7j77ug5htp4c6zquecvxlyrvahhztch/spack-build-out.txt


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