List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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bertini 1.5

Compiler Fujitsu Compiler 4.4.0a
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/libiconv-1.16-rveg745oel7pthzqe7iyusrxozpfhzha
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/pkgconf-1.7.3-e7n3ibmo3qglloicw627euk3653lj7dy
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/xz-5.2.5-nbhstuvzbff45w4irf5d63bwnoaydl5l
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/zlib-1.2.11-y27qgb4znlcsleon2lxlxsng52nd4rzj
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/berkeley-db-18.1.40-bcpbh3jxr5snfw5botpbzrncua2jgxtk
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/libsigsegv-2.12-7mdbq7aymwdyer55kqxtwkmabrqfrjio
==> fujitsu-mpi@4.3.1 : has external module in ['lang/tcsds-1.2.30a']
[+] /opt/FJSVxtclanga/tcsds-1.2.30a (external fujitsu-mpi-4.3.1-uzvxr3eqtfulyujbjs4xxt5t3fka76rl)
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/autoconf-archive-2019.01.06-rnynorzsetcoobbctraaofx5ngh7c5pi
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/tar-1.32-4tib3w4bufsp5rmh77dedae6yqrfnztu
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/diffutils-3.7-4tdgwdjkarwx76hsznr273ee5knouaav
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/ncurses-6.2-3cvcdzzqxzuywrbb3fgurgwja7neml6e
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/libxml2-2.9.10-cxwfsnmjxdlc3yylykvohwacbifuuo4b
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/m4-1.4.18-higyfcycqmi77nsmij4ttoph4decqvjg
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/bzip2-1.0.8-fpw7smnssbalg5kr3ekc2bypkyadczd6
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/readline-8.0-x67xwcqnux4xmbj3b7oms47n5fup44e3
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/libtool-2.4.6-heralap5rbm3tgxvlguunwf4tk7jvcri
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/gettext-0.21-7vwvgn6bx6ay6x55ts7wckfucyvtig76
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/gdbm-1.18.1-gc7q4o3p6frzkxzisvr2j44kljoktzjm
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/perl-5.32.1-zxtqmyvx2crwpk7xxpfk5eu5ntxspszz
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/texinfo-6.5-rlasgr2h5c4ut226stz6hruafkv7k7t6
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/help2man-1.47.16-wwig3h6o3wa7xncdekbopx7axaidgu6u
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/autoconf-2.69-ou7nluauc5ehv42p3q56tvz4t746r4l7
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/bison-3.7.4-7ji3gfszhyld4j3uf7pbylo4m6rtjfdj
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/automake-1.16.3-5gcjddw55bul6jjqn7sfepr3qfs4rmow
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/gmp-6.1.2-hkcgasicp2lcddhdrqb4p6kyuvprvkcd
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/findutils-4.6.0-bltgzp74oqd75fbg4jbywy2seps574ur
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/mpfr-4.0.2-6cg7wcvb7f6wnxwbwuechonpdiyy5gzm
[+] /vol0001/g9300001/u93001/all-test/fj/spack/opt/spack/linux-rhel8-a64fx/fj-4.4.0a/flex-2.6.4-lngohg7wxi576z7n4tkqga2zxw5dcim7
==> Installing bertini-1.5-7ghpc2rmwtol53it2s3pfjsysgmk4jag
==> No binary for bertini-1.5-7ghpc2rmwtol53it2s3pfjsysgmk4jag found: installing from source
==> Warning: Missing a source id for fujitsu-mpi@4.3.1
==> Warning: Missing a source id for fujitsu-mpi@4.3.1
==> Fetching https://postk-web.r-ccs.riken.jp/spack.mirror/_source-cache/archive/a9/a9a68a96e180fe6a93ba1bc1d61f522784c9a053b049b2cbd98008b5b6deec3c.tar.gz
==> No patches needed for bertini
==> bertini: Executing phase: 'autoreconf'
==> bertini: Executing phase: 'configure'
==> bertini: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16'

1 error found in build log:
136 running CONFIG_SHELL=/bin/sh /bin/sh /home/g9300001/u93001/spack-st
age/spack-stage-bertini-1.5-7ghpc2rmwtol53it2s3pfjsysgmk4jag/spack-
src/configure --prefix=/vol0001/g9300001/u93001/all-test/fj/spack/o
pt/spack/linux-rhel8-a64fx/fj-4.4.0a/bertini-1.5-7ghpc2rmwtol53it2s
3pfjsysgmk4jag CC=/vol0001/g9300001/u93001/all-test/fj/spack/lib/sp
ack/env/fj/fcc --no-create --no-recursion
137 checking for a BSD-compatible install... /usr/bin/install -c
138 checking whether build environment is sane... yes
139 checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
140 checking for gawk... gawk
141 checking whether make sets $(MAKE)... yes
>> 142 configure: error: source directory already configured; run "make di
stclean" there first
143 make: *** [Makefile:618: config.status] Error 1

See build log for details:
/home/g9300001/u93001/spack-stage/spack-stage-bertini-1.5-7ghpc2rmwtol53it2s3pfjsysgmk4jag/spack-build-out.txt


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