List of Open Source Software which can be built on Fugaku
 |
Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
|
atlas 3.10.3
| Compiler | Arm Compiler 20.1.0 |
|---|---|
| Result | Dependency Error |
Failed Reason
Failed to install dependency package :
------------------------------------------------
ddfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
47158 /usr/local/spack/opt/spack/linux-rhel7-aarch64/gcc-4.8.5/gcc-9.1.0-nhd4fe4i6jtn2hnc
fzumegojm6hsznxy/bin/gcc -O -fomit-frame-pointer -fPIC -fPIC -shared -o libsatlas.
so \
47159 -Wl,--whole-archive liblapack.a libf77blas.a libcblas.a libatlas.a -Wl,-
-no-whole-archive -lc -lpthread -lm
47160 ld: libcblas.a(cblas_xerbla.o): relocation R_AARCH64_ADR_PREL_PG_HI21 against symbo
l `stderr@@GLIBC_2.17' which may bind externally can not be used when making a shar
ed object; recompile with -fPIC
47161 ld: libcblas.a(cblas_xerbla.o)(.text+0x34): unresolvable R_AARCH64_ADR_PREL_PG_HI21
relocation against symbol `stderr@@GLIBC_2.17'
>> 47162 ld: final link failed: Bad value
>> 47163 collect2: error: ld returned 1 exit status
47164 make[7]: *** [Makefile:130: GCCTRY_norp] Error 1
47165 make[7]: Leaving directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27d
dfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
47166 make[7]: Entering directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27
ddfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
47167 /usr/local/spack/opt/spack/linux-rhel7-aarch64/gcc-4.8.5/gcc-9.1.0-nhd4fe4i6jtn2hnc
fzumegojm6hsznxy/bin/gcc -O -fomit-frame-pointer -fPIC -fPIC -shared -o libsatlas.
so \
47168 -Wl,"-rpath-link /fefs/home/r0007/all-test/arm/spack/opt/spack/linux-rhe
l8-thunderx2/arm-20.1.0.15/atlas-3.10.3-xchj27ddfgpcti5yescyjhltekiachbw/lib" \
47169 -Wl,--whole-archive liblapack.a libf77blas.a libcblas.a libatlas.a -Wl,-
-no-whole-archive -lc -lpthread -lm
47170 ld: unrecognised option: -rpath-link /fefs/home/r0007/all-test/arm/spack/opt/spack/
linux-rhel8-thunderx2/arm-20.1.0.15/atlas-3.10.3-xchj27ddfgpcti5yescyjhltekiachbw/l
ib
>> 47171 collect2: error: ld returned 1 exit status
47172 make[7]: *** [Makefile:126: GCCTRY] Error 1
47173 make[7]: Leaving directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27d
dfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
47174 make[7]: Entering directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27
ddfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
47175 ld -shared -soname /fefs/home/r0007/all-test/arm/spack/opt/spack/linux-rhel8-thund
erx2/arm-20.1.0.15/atlas-3.10.3-xchj27ddfgpcti5yescyjhltekiachbw/lib/libsatlas.so -
o libsatlas.so \
47176 -rpath-link /fefs/home/r0007/all-test/arm/spack/opt/spack/linux-rhel8-th
underx2/arm-20.1.0.15/atlas-3.10.3-xchj27ddfgpcti5yescyjhltekiachbw/lib \
47177 --whole-archive liblapack.a libf77blas.a libcblas.a libatlas.a --no-whol
e-archive -lc -lpthread -lm
47178 ld: libcblas.a(cblas_xerbla.o): relocation R_AARCH64_ADR_PREL_PG_HI21 against symbo
l `stderr@@GLIBC_2.17' which may bind externally can not be used when making a shar
ed object; recompile with -fPIC
47179 ld: libcblas.a(cblas_xerbla.o)(.text+0x34): unresolvable R_AARCH64_ADR_PREL_PG_HI21
relocation against symbol `stderr@@GLIBC_2.17'
>> 47180 ld: final link failed: Bad value
47181 make[7]: *** [Makefile:122: LDTRY] Error 1
47182 make[7]: Leaving directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27d
dfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
47183 make[7]: Entering directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27
ddfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
47184 /usr/local/spack/opt/spack/linux-rhel7-aarch64/gcc-4.8.5/gcc-9.1.0-nhd4fe4i6jtn2hnc
fzumegojm6hsznxy/bin/gcc -O -fomit-frame-pointer -fPIC -fPIC -shared -o libsatlas.
so \
47185 -Wl,--whole-archive liblapack.a libf77blas.a libcblas.a libatlas.a -Wl,-
-no-whole-archive -lc -lpthread -lm
47186 ld: libcblas.a(cblas_xerbla.o): relocation R_AARCH64_ADR_PREL_PG_HI21 against symbo
l `stderr@@GLIBC_2.17' which may bind externally can not be used when making a shar
ed object; recompile with -fPIC
47187 ld: libcblas.a(cblas_xerbla.o)(.text+0x34): unresolvable R_AARCH64_ADR_PREL_PG_HI21
relocation against symbol `stderr@@GLIBC_2.17'
>> 47188 ld: final link failed: Bad value
>> 47189 collect2: error: ld returned 1 exit status
47190 make[7]: *** [Makefile:130: GCCTRY_norp] Error 1
47191 make[7]: Leaving directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27d
dfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
47192 make[7]: Entering directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27
ddfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
47193 ld -shared -soname /fefs/home/r0007/all-test/arm/spack/opt/spack/linux-rhel8-thund
erx2/arm-20.1.0.15/atlas-3.10.3-xchj27ddfgpcti5yescyjhltekiachbw/lib/libsatlas.so -
o libsatlas.so \
47194 -rpath-link /fefs/home/r0007/all-test/arm/spack/opt/spack/linux-rhel8-th
underx2/arm-20.1.0.15/atlas-3.10.3-xchj27ddfgpcti5yescyjhltekiachbw/lib \
47195 --whole-archive liblapack.a libf77blas.a libcblas.a libatlas.a --no-whol
e-archive -lpthread -lm
...
48286 ATL_trsv.c:(.text+0x254): dangerous relocation: unsupported relocation
48287 make[7]: *** [Makefile:122: LDTRY] Error 1
48288 make[7]: Leaving directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27d
dfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
48289 make[7]: Entering directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27
ddfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
48290 /usr/local/spack/opt/spack/linux-rhel7-aarch64/gcc-4.8.5/gcc-9.1.0-nhd4fe4i6jtn2hnc
fzumegojm6hsznxy/bin/gcc -O -fomit-frame-pointer -fPIC -fPIC -shared -o libsatlas.
so \
48291 -Wl,--whole-archive liblapack.a libf77blas.a libcblas.a libatlas.a -Wl,-
-no-whole-archive -lkernel32
>> 48292 ld: cannot find -lkernel32
>> 48293 collect2: error: ld returned 1 exit status
48294 make[7]: *** [Makefile:130: GCCTRY_norp] Error 1
48295 make[7]: Leaving directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27d
dfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
48296 make[7]: Entering directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27
ddfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
48297 /usr/local/spack/opt/spack/linux-rhel7-aarch64/gcc-4.8.5/gcc-9.1.0-nhd4fe4i6jtn2hnc
fzumegojm6hsznxy/bin/gcc -O -fomit-frame-pointer -fPIC -fPIC -shared -o libsatlas.
so \
48298 -Wl,"-rpath-link /fefs/home/r0007/all-test/arm/spack/opt/spack/linux-rhe
l8-thunderx2/arm-20.1.0.15/atlas-3.10.3-xchj27ddfgpcti5yescyjhltekiachbw/lib" \
48299 -Wl,--whole-archive liblapack.a libf77blas.a libcblas.a libatlas.a -Wl,-
-no-whole-archive -lpthread -lm
48300 ld: unrecognised option: -rpath-link /fefs/home/r0007/all-test/arm/spack/opt/spack/
linux-rhel8-thunderx2/arm-20.1.0.15/atlas-3.10.3-xchj27ddfgpcti5yescyjhltekiachbw/l
ib
>> 48301 collect2: error: ld returned 1 exit status
48302 make[7]: *** [Makefile:126: GCCTRY] Error 1
48303 make[7]: Leaving directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27d
dfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
48304 make[6]: *** [Makefile:138: TRYALL] Error 2
48305 make[6]: Leaving directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27d
dfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
48306 make[5]: *** [Makefile:193: fat_shared] Error 2
48307 make[5]: Leaving directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27d
dfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib'
...
48753 /tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27ddfgpcti5y
escyjhltekiachbw/spack-src/spack-build/lib/libtstatlas.a /tmp/r0007/spack-stage/spa
ck-stage-atlas-3.10.3-xchj27ddfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib/li
blapack.a /tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27ddfgpcti5yescyjhlte
kiachbw/spack-src/spack-build/lib/libcblas.a /tmp/r0007/spack-stage/spack-stage-atl
as-3.10.3-xchj27ddfgpcti5yescyjhltekiachbw/spack-src/spack-build/lib/libf77blas.a \
48754 /tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27ddfgpcti5y
escyjhltekiachbw/spack-src/spack-build/lib/libatlas.a -lpthread -lm
48755 sinvtst.o: In function `main':
48756 invtst.c:(.text+0x16dc): multiple definition of `main'
48757 /opt/arm/arm-linux-compiler-20.1_Generic-AArch64_RHEL-7_aarch64-linux/llvm-bin/../l
ib//libflangmain.a(flangmain.c.o):flangmain.c:(.text.main+0x0): first defined here
48758 /opt/arm/arm-linux-compiler-20.1_Generic-AArch64_RHEL-7_aarch64-linux/llvm-bin/../l
ib//libflangmain.a(flangmain.c.o): In function `main':
>> 48759 flangmain.c:(.text.main+0x38): undefined reference to `MAIN_'
>> 48760 clang-9: error: linker command failed with exit code 1 (use -v to see invocation)
48761 make[3]: *** [Makefile:1898: xsinvtst] Error 1
48762 make[3]: Leaving directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27d
dfgpcti5yescyjhltekiachbw/spack-src/spack-build/bin'
48763 make[2]: *** [Makefile:376: sanity_test] Error 2
48764 make[2]: Leaving directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27d
dfgpcti5yescyjhltekiachbw/spack-src/spack-build/bin'
>> 48765 make[1]: *** [Make.top:28: sanity_test] Error 2
48766 make[1]: Leaving directory '/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27d
dfgpcti5yescyjhltekiachbw/spack-src/spack-build'
48767 make: *** [Makefile:626: test] Error 2
See build log for details:
/tmp/r0007/spack-stage/spack-stage-atlas-3.10.3-xchj27ddfgpcti5yescyjhltekiachbw/spack-build-out.txt
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