List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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bertini 1.5

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/gnuconfig-2021-08-14-ezyvb3gy7i726n45kwb44a4vxle3if3i
[+] /usr (external m4-1.4.18-zz6lq3qkexluljpiw5yxqyozzhkijvpn)
[+] /usr (external perl-5.26.3-cfeod657avcbjzlstrxizeulrdfnqb3r)
[+] /opt/FJSVxtclanga/tcsds-latest (external fujitsu-mpi-head-zlunfezjmwzq5pfrxkeb3tpfc6ja5cxz)
[+] /usr (external gmp-6.1.2-aweb6qdw6k72z5szxngketpntkdvprym)
[+] /usr (external autoconf-2.69-me3qacnq6as2fvkhuiia2ks5udajax3b)
[+] /usr (external automake-1.16.1-gbketv7wv244mk5mkf65hyjxew4yocxo)
[+] /usr (external libtool-2.4.6-snb3wjzerg4q7w57akrhqlg2hfvalawy)
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/findutils-4.8.0-hbp3a5kijvggip2hu6cjjjtqnruxmh76
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libiconv-1.16-53uyda5tbc4cft2ipchbsft56qsivt74
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/autoconf-archive-2019.01.06-5xupizjwrucyxednhyet5tkdx7jnlc4n
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/texinfo-6.5-dqgnoe2tyqkmtth6epsjkfp5uwgwvtwz
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/diffutils-3.8-c3z2qrsurl5l57yct4kuz2mxjyjywwgz
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/mpfr-4.1.0-lgxxsheprifg75vh4dowz2xxfiy23x4s
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/bison-3.8.2-ta2ecl7xyo4uznxun3zvhbitdklgbcck
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/flex-2.6.3-pefwrvzgcd6f4nkwmynv7ibzizsip6wk
==> Installing bertini-1.5-rxfthc5estyk3twiddfak2kuswpqfyeo
==> No binary for bertini-1.5-rxfthc5estyk3twiddfak2kuswpqfyeo found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/a9/a9a68a96e180fe6a93ba1bc1d61f522784c9a053b049b2cbd98008b5b6deec3c.tar.gz
==> No patches needed for bertini
==> bertini: Executing phase: 'autoreconf'
==> bertini: Executing phase: 'configure'
==> bertini: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'

20 errors found in build log:
109 /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-bertini-1.5-rxfthc
5estyk3twiddfak2kuswpqfyeo/spack-src/config/missing: line 52: autom
ake-1.11: command not found
110 WARNING: `automake-1.11' is missing on your system. You should onl
y need it if
111 you modified `Makefile.am', `acinclude.m4' or `configure.a
c'.
112 You might want to install the `Automake' and `Perl' packag
es.
113 Grab them from any GNU archive site.
114 configure.ac:26: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call
detected in body
>> 115 ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from..
.
>> 116 ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded fro
m...
>> 117 ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from
...
>> 118 m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from...
>> 119 m4/libtool.m4:4161: _LT_LINKER_SHLIBS is expanded from...
>> 120 m4/libtool.m4:5236: _LT_LANG_C_CONFIG is expanded from...
>> 121 m4/libtool.m4:138: _LT_SETUP is expanded from...
>> 122 m4/libtool.m4:67: LT_INIT is expanded from...
>> 123 m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from...
>> 124 configure.ac:26: the top level
125 configure.ac:26: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call
detected in body
>> 126 ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from..
.
>> 127 ../../lib/autoconf/general.m4:2661: _AC_LINK_IFELSE is expanded fro
m...
>> 128 ../../lib/autoconf/general.m4:2678: AC_LINK_IFELSE is expanded from
...
>> 129 m4/libtool.m4:4161: _LT_LINKER_SHLIBS is expanded from...
>> 130 m4/libtool.m4:5236: _LT_LANG_C_CONFIG is expanded from...
>> 131 m4/libtool.m4:138: _LT_SETUP is expanded from...
>> 132 m4/libtool.m4:67: LT_INIT is expanded from...
>> 133 m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from...
>> 134 configure.ac:26: the top level
135 /bin/sh ./config.status --recheck
136 running CONFIG_SHELL=/bin/sh /bin/sh /home/rccs-sdt/a01008/spack-st
age/spack-stage-bertini-1.5-rxfthc5estyk3twiddfak2kuswpqfyeo/spack-
src/configure --prefix=/vol0003/rccs-sdt/a01008/spack-all-test/env-
20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/bertini-1.5-rxf
thc5estyk3twiddfak2kuswpqfyeo CC=/vol0003/rccs-sdt/a01008/spack-all
-test/env-20220225/spack/lib/spack/env/fj/fcc --no-create --no-recu
rsion
137 checking for a BSD-compatible install... /usr/bin/install -c
138 checking whether build environment is sane... yes
139 checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
140 checking for gawk... gawk
141 checking whether make sets $(MAKE)... yes
>> 142 configure: error: source directory already configured; run "make di
stclean" there first
143 make: *** [Makefile:618: config.status] Error 1

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-bertini-1.5-rxfthc5estyk3twiddfak2kuswpqfyeo/spack-build-out.txt


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