List of Open Source Software which can be built on Fugaku

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 Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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ont-albacore

Package

ont-albacore

Description

Albacore is a software project that provides an entry point to the
Oxford Nanopore basecalling algorithms. It can be run from the command
line on Windows and multiple Linux platforms. A selection of
configuration files allow basecalling DNA libraries made with our
current range of sequencing kits and Flow Cells.

Note

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