List of Open Source Software which can be built on Fugaku
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Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
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orthofinder
Package
orthofinder
Description
OrthoFinder is a fast, accurate and comprehensive analysis tool for
comparative genomics. It finds orthologues and orthogroups infers rooted
gene trees for all orthogroups and infers a rooted species tree for the
species being analysed. OrthoFinder also provides comprehensive
statistics for comparative genomic analyses. OrthoFinder is simple to
use and all you need to run it is a set of protein sequence files (one
per species) in FASTA format.
Note
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