List of Open Source Software which can be built on Fugaku
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Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
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r-acde
Package
r-acde
Description
Artificial Components Detection of Differentially Expressed Genes. This
package provides a multivariate inferential analysis method for
detecting differentially expressed genes in gene expression data. It
uses artificial components, close to the data's principal components but
with an exact interpretation in terms of differential genetic
expression, to identify differentially expressed genes while controlling
the false discovery rate (FDR). The methods on this package are
described in the vignette or in the article 'Multivariate Method for
Inferential Identification of Differentially Expressed Genes in Gene
Expression Experiments' by J. P. Acosta, L. Lopez-Kleine and S. Restrepo
(2015, pending publication).
Note
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