List of Open Source Software which can be built on Fugaku
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Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
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r-deseq2
Package
r-deseq2
Description
Differential gene expression analysis based on the negative binomial
distribution. Estimate variance-mean dependence in count data from high-
throughput sequencing assays and test for differential expression based
on a model using the negative binomial distribution.
Note
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