List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-fgsea

Package

r-fgsea

Description

Fast Gene Set Enrichment Analysis. The package implements an algorithm
for fast gene set enrichment analysis. Using the fast algorithm allows
to make more permutations and get more fine grained p-values, which
allows to use accurate stantard approaches to multiple hypothesis
correction.

Note


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