List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-goplot

Package

r-goplot

Description

Visualization of Functional Analysis Data. Implementation of
multilayered visualizations for enhanced graphical representation of
functional analysis data. It combines and integrates omics data derived
from expression and functional annotation enrichment analyses. Its
plotting functions have been developed with an hierarchical structure in
mind: starting from a general overview to identify the most enriched
categories (modified bar plot, bubble plot) to a more detailed one
displaying different types of relevant information for the molecules in
a given set of categories (circle plot, chord plot, cluster plot, Venn
diagram, heatmap).

Note


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