List of Open Source Software which can be built on Fugaku

Spack logo
Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
Please contact us from email:

r-kegggraph

Package

r-kegggraph

Description

KEGGgraph: A graph approach to KEGG PATHWAY in R and Bioconductor.
KEGGGraph is an interface between KEGG pathway and graph object as well
as a collection of tools to analyze, dissect and visualize these graphs.
It parses the regularly updated KGML (KEGG XML) files into graph models
maintaining all essential pathway attributes. The package offers
functionalities including parsing, graph operation, visualization and
etc.

Note


<= Back to list