List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-ordinal

Package

r-ordinal

Description

Regression Models for Ordinal Data. Implementation of cumulative link
(mixed) models also known as ordered regression models, proportional
odds models, proportional hazards models for grouped survival times and
ordered logit/probit/... models. Estimation is via maximum likelihood
and mixed models are fitted with the Laplace approximation and adaptive
Gauss-Hermite quadrature. Multiple random effect terms are allowed and
they may be nested, crossed or partially nested/crossed. Restrictions of
symmetry and equidistance can be imposed on the thresholds (cut-
points/intercepts). Standard model methods are available (summary,
anova, drop-methods, step, confint, predict etc.) in addition to profile
methods and slice methods for visualizing the likelihood function and
checking convergence.

Note


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