List of Open Source Software which can be built on Fugaku
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Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
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r-pathview
Package
r-pathview
Description
a tool set for pathway based data integration and visualization.
Pathview is a tool set for pathway based data integration and
visualization. It maps and renders a wide variety of biological data on
relevant pathway graphs. All users need is to supply their data and
specify the target pathway. Pathview automatically downloads the pathway
graph data, parses the data file, maps user data to the pathway, and
render pathway graph with the mapped data. In addition, Pathview also
seamlessly integrates with pathway and gene set (enrichment) analysis
tools for large-scale and fully automated analysis.
Note
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