List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-picante

Package

r-picante

Description

R tools for integrating phylogenies and ecology. Functions for phylocom
integration, community analyses, null-models, traits and evolution.
Implements numerous ecophylogenetic approaches including measures of
community phylogenetic and trait diversity, phylogenetic signal,
estimation of trait values for unobserved taxa, null models for
community and phylogeny randomizations, and utility functions for data
input/output and phylogeny plotting. A full description of package
functionality and methods are provided by Kembel et al. (2010)
<doi:10.1093/bioinformatics/btq166>.

Note


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