List of Open Source Software which can be built on Fugaku

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 Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-rrblup

Package

r-rrblup

Description

Ridge Regression and Other Kernels for Genomic Selection. Software for
genomic prediction with the RR-BLUP mixed model (Endelman 2011,
<doi:10.3835/plantgenome2011.08.0024>). One application is to estimate
marker effects by ridge regression; alternatively, BLUPs can be
calculated based on an additive relationship matrix or a Gaussian
kernel.

Note

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