List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-rrpp

Package

r-rrpp

Description

Linear Model Evaluation with Randomized Residuals in a Permutation
Procedure. Linear model calculations are made for many random versions
of data. Using residual randomization in a permutation procedure, sums
of squares are calculated over many permutations to generate empirical
probability distributions for evaluating model effects. This packaged is
described by Collyer & Adams (2018) <doi:10.1111/2041-210X.13029>.
Additionally, coefficients, statistics, fitted values, and residuals
generated over many permutations can be used for various procedures
including pairwise tests, prediction, classification, and model
comparison. This package should provide most tools one could need for
the analysis of high-dimensional data, especially in ecology and
evolutionary biology, but certainly other fields, as well.

Note


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