List of Open Source Software which can be built on Fugaku

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 Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-rsamtools

Package

r-rsamtools

Description

Binary alignment (BAM), FASTA, variant call (BCF), and tabix file
import. This package provides an interface to the 'samtools',
'bcftools', and 'tabix' utilities for manipulating SAM (Sequence
Alignment / Map), FASTA, binary variant call (BCF) and compressed
indexed tab-delimited (tabix) files.

Note

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