List of Open Source Software which can be built on Fugaku
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Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
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sabre
Package
sabre
Description
Sabre is a tool that will demultiplex barcoded reads into separate
files. It will work on both single-end and paired-end data in fastq
format. It simply compares the provided barcodes with each read and
separates the read into its appropriate barcode file, after stripping
the barcode from the read (and also stripping the quality values of the
barcode bases). If a read does not have a recognized barcode, then it is
put into the unknown file.
Note
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