List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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sspace-standard

Package

sspace-standard

Description

SSPACE standard is a stand-alone program for scaffolding pre-assembled
contigs using NGS paired-read data Note: A manual download is required
for SSPACE-Standard. Spack will search your current directory for the
download file. Alternatively, add this file to a mirror so that Spack
can find it. For instructions on how to set up a mirror, see
https://spack.readthedocs.io/en/latest/mirrors.html

Note


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