List of Open Source Software which can be built on Fugaku
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Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
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r-genetics
Package
r-genetics
Description
Population Genetics. Classes and methods for handling genetic data.
Includes classes to represent genotypes and haplotypes at single markers
up to multiple markers on multiple chromosomes. Function include allele
frequencies, flagging homo/heterozygotes, flagging carriers of certain
alleles, estimating and testing for Hardy-Weinberg disequilibrium,
estimating and testing for linkage disequilibrium, ...
Note
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