List of Open Source Software which can be built on Fugaku

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 Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-hdf5array

Package

r-hdf5array

Description

HDF5 backend for DelayedArray objects. Implements the HDF5Array and
TENxMatrix classes, 2 convenient and memory-efficient array-like
containers for on-disk representation of HDF5 datasets. HDF5Array is for
datasets that use the conventional (i.e. dense) HDF5 representation.
TENxMatrix is for datasets that use the HDF5-based sparse matrix
representation from 10x Genomics (e.g. the 1.3 Million Brain Cell
Dataset). Both containers being DelayedArray extensions, they support
all operations supported by DelayedArray objects. These operations can
be either delayed or block-processed.

Note

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