List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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gate

Package

gate

Description

Simulations of Preclinical and Clinical Scans in Emission Tomography,
Transmission Tomography and Radiation Therapy GATE is an advanced
opensource software developed by the international OpenGATE
collaboration and dedicated to numerical simulations in medical imaging
and radiotherapy. It currently supports simulations of Emission
Tomography (Positron Emission Tomography - PET and Single Photon
Emission Computed Tomography - SPECT), Computed Tomography (CT), Optical
Imaging (Bioluminescence and Fluorescence) and Radiotherapy experiments.
Using an easy-to-learn macro mechanism to configurate simple or highly
sophisticated experimental settings, GATE now plays a key role in the
design of new medical imaging devices, in the optimization of
acquisition protocols and in the development and assessment of image
reconstruction algorithms and correction techniques. It can also be used
for dose calculation in radiotherapy experiments.

Note


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