List of Open Source Software which can be built on Fugaku

Spack logo
Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
Please contact us from email:

hybrid-lambda

Package

hybrid-lambda

Description

Hybrid-Lambda is a software package that can simulate gene trees within
a rooted species network or a rooted species tree under the coalescent
process. The main feature of this program is that users can choose to
use the standard Kingman coalescent process, which produces bifurcating
genealogies, or two other Lambda coalescent processes, which produce
multifurcating genealogies. The other feature is that hybrid sim uses
extended Newick formatted strings to make it easier to represent
hybridization events between species.

Note


<= Back to list