List of Open Source Software which can be built on Fugaku
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Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
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r-pegas
Package
r-pegas
Description
Population and Evolutionary Genetics Analysis System. Functions for
reading, writing, plotting, analysing, and manipulating allelic and
haplotypic data, including from VCF files, and for the analysis of
population nucleotide sequences and micro-satellites including
coalescent analyses, linkage disequilibrium, population structure (Fst,
Amova) and equilibrium (HWE), haplotype networks, minimum spanning tree
and network, and median-joining networks.
Note
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