List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-afex

Package

r-afex

Description

Analysis of Factorial Experiments. Convenience functions for analyzing
factorial experiments using ANOVA or mixed models. aov_ez(), aov_car(),
and aov_4() allow specification of between, within (i.e., repeated-
measures), or mixed (i.e., split-plot) ANOVAs for data in long format
(i.e., one observation per row), automatically aggregating multiple
observations per individual and cell of the design. mixed() fits mixed
models using lme4::lmer() and computes p-values for all fixed effects
using either Kenward-Roger or Satterthwaite approximation for degrees of
freedom (LMM only), parametric bootstrap (LMMs and GLMMs), or likelihood
ratio tests (LMMs and GLMMs). afex_plot() provides a high-level
interface for interaction or one-way plots using ggplot2, combining raw
data and model estimates. afex uses type 3 sums of squares as default
(imitating commercial statistical software).

Note


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