List of Open Source Software which can be built on Fugaku

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 Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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grnboost

Package

grnboost

Description

GRNBoost is a library built on top of Apache Spark that implements a
scalable strategy for gene regulatory network (GRN) inference. See
https://github.com/aertslab/GRNBoost/blob/master/docs/user_guide.md for
the user guide. The location of xgboost4j-<version>.jar and GRNBoost.jar
are set to $XGBOOST_JAR and $GRNBOOST_JAR. Path to
xgboost4j-<version>.jar is also added to CLASSPATH.

Note

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