List of Open Source Software which can be built on Fugaku
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Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
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r-seuratobject
Package
r-seuratobject
Description
Data Structures for Single Cell Data. Defines S4 classes for single-cell
genomic data and associated information, such as dimensionality
reduction embeddings, nearest-neighbor graphs, and spatially-resolved
coordinates. Provides data access methods and R-native hooks to ensure
the Seurat object is familiar to other R users. See Satija R, Farrell J,
Gennert D, et al (2015) <doi:10.1038/nbt.3192>, Macosko E, Basu A,
Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>, and Stuart T,
Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031> for more
details.
Note
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