List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-treeio

Package

r-treeio

Description

Base Classes and Functions for Phylogenetic Tree Input and Output.
'treeio' is an R package to make it easier to import and store
phylogenetic tree with associated data; and to link external data from
different sources to phylogeny. It also supports exporting phylogenetic
tree with heterogeneous associated data to a single tree file and can be
served as a platform for merging tree with associated data and
converting file formats.

Note


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