List of Open Source Software which can be built on Fugaku

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 Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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anicalculator

Package

anicalculator

Description

This tool will calculate the bidirectional average nucleotide identity
(gANI) and Alignment Fraction (AF) between two genomes. Note: A manual
download is required for ANIcalculator. Spack will search your current
directory for the download file. Alternatively, add this file to a
mirror so that Spack can find it. For instructions on how to set up a
mirror, see https://spack.readthedocs.io/en/latest/mirrors.html

Note

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