List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-metapod

Package

r-metapod

Description

Meta-Analyses on P-Values of Differential Analyses. Implements a variety
of methods for combining p-values in differential analyses of genome-
scale datasets. Functions can combine p-values across different tests in
the same analysis (e.g., genomic windows in ChIP-seq, exons in RNA-seq)
or for corresponding tests across separate analyses (e.g., replicated
comparisons, effect of different treatment conditions). Support is
provided for handling log-transformed input p-values, missing values and
weighting where appropriate.

Note


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