List of Open Source Software which can be built on Fugaku

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 Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-signac

Package

r-signac

Description

Analysis of Single-Cell Chromatin Data. A framework for the analysis and
exploration of single-cell chromatin data. The 'Signac' package contains
functions for quantifying single-cell chromatin data, computing per-cell
quality control metrics, dimension reduction and normalization,
visualization, and DNA sequence motif analysis. Reference: Stuart et al.
(2021) <doi:10.1038/s41592-021-01282-5>.

Note

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