List of Open Source Software which can be built on Fugaku
 |
Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
|
bioconductor-ebseq
Package
bioconductor-ebseq
Description
An R package for gene and isoform differential expression analysis of
RNA-seq data. R/EBSeq is an R package for identifying genes and isoforms
differentially expressed (DE) across two or more biological conditions
in an RNA-seq experiment. Details can be found in Leng et al., 2013. It
provides the syntax required for identifying DE genes and isoforms in a
two-group RNA-seq experiment as well for identifying DE genes across
more than two conditions (the commands for identifying DE isoforms
across more than two conditions are the same as those required for gene-
level analysis).
Note
<= Back to list