List of Open Source Software which can be built on Fugaku
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Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
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bioconductor-tximeta
Package
bioconductor-tximeta
Description
Transcript Quantification Import with Automatic Metadata Transcript
quantification import from Salmon and alevin with automatic attachment
of transcript ranges and release information, and other associated
metadata. De novo transcriptomes can be linked to the appropriate
sources with linkedTxomes and shared for computational reproducibility.
Note
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