List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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dakota 6.12

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /usr (external bzip2-1.0.6-pkyqs6czmr636ktska3fpjek77reodry)
[+] /usr (external zlib-1.2.11-o3hvygtdcp6vg3bpvsrurq4hgklwtype)
[+] /usr (external ncurses-6.1-qbvus6vwvtyxe33hxq4hbpazkrpy6ctb)
[+] /opt/FJSVxtclanga/tcsds-latest (external fujitsu-mpi-head-zlunfezjmwzq5pfrxkeb3tpfc6ja5cxz)
[+] /usr (external perl-5.26.3-cfeod657avcbjzlstrxizeulrdfnqb3r)
[+] /vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj (external python-3.9.9-3wcip6atrybofsb566d7pjqwhl76u4dp)
==> Installing boost-1.68.0-jqlie5yloqq6m3cwwjatp4a3srvpqthp
==> No binary for boost-1.68.0-jqlie5yloqq6m3cwwjatp4a3srvpqthp found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/7f/7f6130bc3cf65f56a618888ce9d5ea704fa10b462be126ad053e80e553d6d8b7.tar.bz2
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/boost/fujitsu_version_analysis.patch
==> Ran patch() for boost
==> boost: Executing phase: 'install'
==> boost: Successfully installed boost-1.68.0-jqlie5yloqq6m3cwwjatp4a3srvpqthp
Fetch: 4.01s. Build: 1h 1m 12.04s. Total: 1h 1m 16.05s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/boost-1.68.0-jqlie5yloqq6m3cwwjatp4a3srvpqthp
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/cmake-3.21.4-vgsk3aw6j4szlnkzjz3u57u7qtoosnkz
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-data-dumper-2.173-km6efzkd4i6tnsafmyuuxiqayy6pxf47
==> Installing netlib-lapack-3.9.1-doaxmgu47etukkmk3qqo43e3j3qbs2ax
==> No binary for netlib-lapack-3.9.1-doaxmgu47etukkmk3qqo43e3j3qbs2ax found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/d0/d0085d2caf997ff39299c05d4bacb6f3d27001d25a4cc613d48c1f352b73e7e0.tar.gz
==> Ran patch() for netlib-lapack
==> netlib-lapack: Executing phase: 'cmake'
==> Error: ProcessError: Command exited with status 1:
'cmake' '-G' 'Unix Makefiles' '-DCMAKE_INSTALL_PREFIX:STRING=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/netlib-lapack-3.9.1-doaxmgu47etukkmk3qqo43e3j3qbs2ax' '-DCMAKE_BUILD_TYPE:STRING=RelWithDebInfo' '-DCMAKE_INTERPROCEDURAL_OPTIMIZATION:BOOL=OFF' '-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON' '-DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF' '-DCMAKE_INSTALL_RPATH:STRING=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/netlib-lapack-3.9.1-doaxmgu47etukkmk3qqo43e3j3qbs2ax/lib;/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/netlib-lapack-3.9.1-doaxmgu47etukkmk3qqo43e3j3qbs2ax/lib64' '-DCMAKE_PREFIX_PATH:STRING=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/cmake-3.21.4-vgsk3aw6j4szlnkzjz3u57u7qtoosnkz' '-DBUILD_SHARED_LIBS:BOOL=OFF' '-DLAPACKE:BOOL=ON' '-DLAPACKE_WITH_TMG:BOOL=ON' '-DCBLAS=ON' '-DBUILD_DEPRECATED:BOOL=ON' '-DBUILD_TESTING:BOOL=OFF' '/home/rccs-sdt/a01008/spack-stage/spack-stage-netlib-lapack-3.9.1-doaxmgu47etukkmk3qqo43e3j3qbs2ax/spack-src'

6 errors found in build log:
43 No FortranCInterface mangling known for VerifyFortran
44 Call Stack (most recent call first):
45 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/sp
ack/linux-rhel8-a64fx/fj-4.7.0/cmake-3.21.4-vgsk3aw6j4szlnkzjz3u57u
7qtoosnkz/share/cmake-3.21/Modules/FortranCInterface/Verify/CMakeLi
sts.txt:17 (FortranCInterface_HEADER)
46 This warning is for project developers. Use -Wno-dev to suppress i
t.
47
48 -- Verifying Fortran/C Compiler Compatibility - Failed
>> 49 CMake Error at /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225
/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/cmake-3.21.4-vgsk3aw6j4
szlnkzjz3u57u7qtoosnkz/share/cmake-3.21/Modules/FortranCInterface.c
make:391 (message):
50 The Fortran compiler:
51
52 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/
spack/env/fj/frt
53
54 and the C compiler:
55

...

94 [ 80%] Building C object CMakeFiles/VerifyFortranC.dir/VerifyC.
c.o
95 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/
spack/env/fj/fcc -I/vol0003/rccs-sdt/a01008/spack-stage/spack-stag
e-netlib-lapack-3.9.1-doaxmgu47etukkmk3qqo43e3j3qbs2ax/spack-src/sp
ack-build-static/CMakeFiles/FortranCInterface/VerifyC -O3 -DNDEBUG
-MD -MT CMakeFiles/VerifyFortranC.dir/VerifyC.c.o -MF CMakeFiles/Ve
rifyFortranC.dir/VerifyC.c.o.d -o CMakeFiles/VerifyFortranC.dir/Ver
ifyC.c.o -c /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/sp
ack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/cmake-3.21.4-vgsk3aw6j4szl
nkzjz3u57u7qtoosnkz/share/cmake-3.21/Modules/FortranCInterface/Veri
fy/VerifyC.c
96 [100%] Linking C executable VerifyFortranC
97 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/
spack/linux-rhel8-a64fx/fj-4.7.0/cmake-3.21.4-vgsk3aw6j4szlnkzjz3u5
7u7qtoosnkz/bin/cmake -E cmake_link_script CMakeFiles/VerifyFortran
C.dir/link.txt --verbose=1
98 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/
spack/env/fj/fcc -O3 -DNDEBUG --linkfortran CMakeFiles/VerifyFortra
nC.dir/main.c.o CMakeFiles/VerifyFortranC.dir/VerifyC.c.o -o Verify
FortranC libVerifyFortran.a -lfj90i -lfj90fmt_sve -lfj90f -lfjsrci
nfo
99 CMakeFiles/VerifyFortranC.dir/main.c.o: In function `main':
>> 100 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spac
k/linux-rhel8-a64fx/fj-4.7.0/cmake-3.21.4-vgsk3aw6j4szlnkzjz3u57u7q
toosnkz/share/cmake-3.21/Modules/FortranCInterface/Verify/main.c:14
: undefined reference to `VerifyFortran'
>> 101 clang-7: error: linker command failed with exit code 1 (use -v
to see invocation)
>> 102 gmake[3]: *** [CMakeFiles/VerifyFortranC.dir/build.make:117: Ve
rifyFortranC] Error 1
103 gmake[3]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-sta
ge/spack-stage-netlib-lapack-3.9.1-doaxmgu47etukkmk3qqo43e3j3qbs2ax
/spack-src/spack-build-static/CMakeFiles/FortranCInterface/VerifyC'
>> 104 gmake[2]: *** [CMakeFiles/Makefile2:114: CMakeFiles/VerifyFortr
anC.dir/all] Error 2
105 gmake[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-sta
ge/spack-stage-netlib-lapack-3.9.1-doaxmgu47etukkmk3qqo43e3j3qbs2ax
/spack-src/spack-build-static/CMakeFiles/FortranCInterface/VerifyC'
>> 106 gmake[1]: *** [CMakeFiles/Makefile2:121: CMakeFiles/VerifyFortr
anC.dir/rule] Error 2
107 gmake[1]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-sta
ge/spack-stage-netlib-lapack-3.9.1-doaxmgu47etukkmk3qqo43e3j3qbs2ax
/spack-src/spack-build-static/CMakeFiles/FortranCInterface/VerifyC'
108 gmake: *** [Makefile:140: VerifyFortranC] Error 2
109
110
111 Call Stack (most recent call first):
112 CBLAS/CMakeLists.txt:9 (FortranCInterface_VERIFY)

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-netlib-lapack-3.9.1-doaxmgu47etukkmk3qqo43e3j3qbs2ax/spack-build-out.txt

==> Warning: Skipping build of dakota-6.12-ody4h3u5fjsw37pk352fj54zbx4utlep since netlib-lapack-3.9.1-doaxmgu47etukkmk3qqo43e3j3qbs2ax failed
==> Error: dakota-6.12-ody4h3u5fjsw37pk352fj54zbx4utlep: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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