List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
Please contact us from email:

damask 3.0.0-alpha5

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
lcnyo/spack-src/src -Werror=odr -Werror=delete-non-virtual-dtor -
Werror=overloaded-virtual -O2 -g -DNDEBUG -Wall -fvisibility=hidde
n -fPIC -std=gnu++11 -MD -MT src/math/simplex/CMakeFiles/simplex.di
r/simplex.cpp.o -MF CMakeFiles/simplex.dir/simplex.cpp.o.d -o CMake
Files/simplex.dir/simplex.cpp.o -c /home/rccs-sdt/a01008/spack-stag
e/spack-stage-z3-4.8.9-fc4us4oohdjrsk4pr4zr7ek5d24lcnyo/spack-src/s
rc/math/simplex/simplex.cpp
348 [ 7%] Building CXX object src/math/hilbert/CMakeFiles/hilbert.dir/
hilbert_basis.cpp.o
349 [ 7%] Building CXX object src/math/simplex/CMakeFiles/simplex.dir/
model_based_opt.cpp.o
350 cd /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-z3-4.8.9-fc4us4
oohdjrsk4pr4zr7ek5d24lcnyo/spack-src/build/src/math/hilbert && /vol
0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spack/en
v/fj/case-insensitive/FCC -D_EXTERNAL_RELEASE -D_LINUX_ -D_MP_INTER
NAL -I/vol0003/rccs-sdt/a01008/spack-stage/spack-stage-z3-4.8.9-fc4
us4oohdjrsk4pr4zr7ek5d24lcnyo/spack-src/build/src -I/home/rccs-sdt/
a01008/spack-stage/spack-stage-z3-4.8.9-fc4us4oohdjrsk4pr4zr7ek5d24
lcnyo/spack-src/src -Werror=odr -Werror=delete-non-virtual-dtor -
Werror=overloaded-virtual -O2 -g -DNDEBUG -Wall -fvisibility=hidde
n -fPIC -std=gnu++11 -MD -MT src/math/hilbert/CMakeFiles/hilbert.di
r/hilbert_basis.cpp.o -MF CMakeFiles/hilbert.dir/hilbert_basis.cpp.
o.d -o CMakeFiles/hilbert.dir/hilbert_basis.cpp.o -c /home/rccs-sdt
/a01008/spack-stage/spack-stage-z3-4.8.9-fc4us4oohdjrsk4pr4zr7ek5d2
4lcnyo/spack-src/src/math/hilbert/hilbert_basis.cpp

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-z3-4.8.9-fc4us4oohdjrsk4pr4zr7ek5d24lcnyo/spack-build-out.txt

[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libbsd-0.11.3-xiejcn74x7lxnfv2gl3k2zsohzdun57v
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/randrproto-1.5.0-ibl7fslez6rhjg5boiyxbickv4p6upxf
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/inputproto-2.3.2-z5vw4hedhfulpou53ympwrbaanznze7j
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/glproto-1.4.17-tijnmbwdjoc7rkg2sqosuy3yyacfueuk
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/xproto-7.0.31-n6xybhebufw3zdril463kwsnnuew4q4i
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/renderproto-0.11.1-q63ef4mmhyjt72oxtqag4n3nw32dea4w
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/xtrans-1.3.5-sgtmuv7h3kn27aay6txsvbgd22lavhcs
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/xextproto-7.3.0-qbikyiot5dv6grrlyfqkuej7gi5oxtcq
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/kbproto-1.0.7-qjgaga75dax4l6dx3f3mnas6dwjwhdeq
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/diffutils-3.8-c3z2qrsurl5l57yct4kuz2mxjyjywwgz
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pyyaml-5.3.1-bvdjlwmjv4b2txebcxr23bp5g3skjlwd
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libjpeg-turbo-2.1.0-uocr25meow4yzjybzchavleirgndwx4i
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-wheel-0.36.2-djbnp5uhukeoervypadpw4j3xzlhvipe
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pip-21.1.2-67q7p6mr5pgcaadfwis3uxls4hrhkyqs
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pybind11-2.8.1-c6s6d623jj2d2ieeyq7bjmq4fbgk5y5b
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-certifi-2021.10.8-unokuqtcoh3uja5zbsqodlngvhkafqpu
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-cython-0.29.24-lk5mfk4vvpwnuiggvotxqgmuso2z5lyb
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-cppy-1.1.0-linzg2uz35ut7khvcm63bayt5nbqlr2e
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-six-1.16.0-7wy35e2zjrxyks3it4qdao6wlgugjsjj
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pyparsing-2.4.7-svkdl2gu6r74fpeovo2dzkur2gjc52i7
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pytz-2021.1-kacp2cftqbyzqvegcf4iswuwo26slg6y
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-mpi4py-3.1.2-z4eydgoy4ox7rqycg2zdlebpi5ghwtla
==> Installing meson-0.60.0-5bupjorarh7h2plbl47fehgwuwuczlug
==> No binary for meson-0.60.0-5bupjorarh7h2plbl47fehgwuwuczlug found: installing from source
==> Warning: Skipping build of llvm-12.0.1-j6xoqmf2wwi2yagpgmuz2n4bqhwr3nuj since z3-4.8.9-fc4us4oohdjrsk4pr4zr7ek5d24lcnyo failed
==> Warning: Skipping build of mesa-21.2.3-by3xe5tph6my6mze3c66sw2vcxjpo2wt since llvm-12.0.1-j6xoqmf2wwi2yagpgmuz2n4bqhwr3nuj failed
==> Warning: Skipping build of mesa-glu-9.0.1-bopnz4oll7wawgnmguepy56owvim3biz since mesa-21.2.3-by3xe5tph6my6mze3c66sw2vcxjpo2wt failed
==> Warning: Skipping build of glew-2.1.0-23xn6qxtxvc6o2h34sxrowmo2rqo2zrr since mesa-glu-9.0.1-bopnz4oll7wawgnmguepy56owvim3biz failed
==> Warning: Skipping build of vtk-9.0.3-dtxrv2vgdftq7xlsxchbw4vufwslngxx since glew-2.1.0-23xn6qxtxvc6o2h34sxrowmo2rqo2zrr failed
==> Warning: Skipping build of py-damask-3.0.0-alpha5-4uocm2n7b47j4srvgf32kjbynylgysx4 since vtk-9.0.3-dtxrv2vgdftq7xlsxchbw4vufwslngxx failed
==> Warning: Skipping build of damask-3.0.0-alpha5-u6dgrob5aic7jrxygbnjfphuw7pbzex3 since py-damask-3.0.0-alpha5-4uocm2n7b47j4srvgf32kjbynylgysx4 failed
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/56/5672a560fc4094c88ca5b8be0487e099fe84357e5045f5aecf1113084800e6fd.tar.gz
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/meson/rpath-0.58.patch
==> meson: Executing phase: 'build'
==> meson: Executing phase: 'install'
==> meson: Successfully installed meson-0.60.0-5bupjorarh7h2plbl47fehgwuwuczlug
Fetch: 0.09s. Build: 3m 10.09s. Total: 3m 10.17s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/meson-0.60.0-5bupjorarh7h2plbl47fehgwuwuczlug
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-markupsafe-2.0.1-4td6e2neiiuadlhwguzdam5injfbrhqz
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/parmetis-4.0.3-daapxkowlrnq3zrstoqvuip6wnetr7vh
==> Installing netcdf-c-4.8.1-txmly6kaq4tr6yrky7svuz4opgf64wzo
==> No binary for netcdf-c-4.8.1-txmly6kaq4tr6yrky7svuz4opgf64wzo found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/bc/bc018cc30d5da402622bf76462480664c6668b55eb16ba205a0dfb8647161dd0.tar.gz
==> No patches needed for netcdf-c
==> netcdf-c: Executing phase: 'autoreconf'
==> netcdf-c: Executing phase: 'configure'
==> netcdf-c: Executing phase: 'build'
==> netcdf-c: Executing phase: 'install'
==> netcdf-c: Successfully installed netcdf-c-4.8.1-txmly6kaq4tr6yrky7svuz4opgf64wzo
Fetch: 0.21s. Build: 12m 18.47s. Total: 12m 18.68s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/netcdf-c-4.8.1-txmly6kaq4tr6yrky7svuz4opgf64wzo
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/expat-2.4.1-6d5wgt5slcremuk5p6srspiodqufzm3h
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libice-1.0.9-boprdw5qnkkrbq4uhpzda7za64y7msp7
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libx11-1.7.0-fyvzrgtkbqtq4v4rxiqvdbd5gvs5z4tj
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/bison-3.8.2-ta2ecl7xyo4uznxun3zvhbitdklgbcck
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pillow-8.0.0-inksfdgdd6trpv2cilc2spyeneedxzt7
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-tomli-1.2.1-qxysj56clo6kspouoq4msjtem3n3lijr
==> Installing py-numpy-1.21.3-f3kebfyeebnrwvomkrvsw2bhbh6uu5j7
==> No binary for py-numpy-1.21.3-f3kebfyeebnrwvomkrvsw2bhbh6uu5j7 found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/63/63571bb7897a584ca3249c86dd01c10bcb5fe4296e3568b2e9c1a55356b6410e.zip
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/py-numpy/check_executables.patch
==> py-numpy: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 1:
'/vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj/bin/python3.9' '-s' 'setup.py' '--no-user-cfg' 'build'
See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-py-numpy-1.21.3-f3kebfyeebnrwvomkrvsw2bhbh6uu5j7/spack-build-out.txt

[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-kiwisolver-1.3.2-ewoonffipal5ap3mcwl4lzxgajk66pvy
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-cycler-0.10.0-iyssuq4lbtydqiwmax5gft7kl54vbthx
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-packaging-21.0-s6cid7alqa7tw3xxefl7ekdcot2fjcgn
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-mako-1.1.4-onmz5sttadbpvimzhaz6uxgu5hihcee6
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/superlu-dist-7.1.1-gcfkavrtr5hy72gbllv5tncorrpse54f
==> Installing netcdf-cxx-4.2-irrpfpb7qfox7dro3e7y6c6o5g2m2qrn
==> No binary for netcdf-cxx-4.2-irrpfpb7qfox7dro3e7y6c6o5g2m2qrn found: installing from source
==> Warning: Skipping build of py-scipy-1.6.1-pwymc4kjnuueg6adtdj5ukbonvj45su5 since py-numpy-1.21.3-f3kebfyeebnrwvomkrvsw2bhbh6uu5j7 failed
==> Warning: Skipping build of py-bottleneck-1.3.2-glrv4yabdfeom6z33jnhgnayydd3bywb since py-numpy-1.21.3-f3kebfyeebnrwvomkrvsw2bhbh6uu5j7 failed
==> Warning: Skipping build of py-pandas-1.3.4-hq5m3o252txt55m7a3s4k3uqnwllxema since py-bottleneck-1.3.2-glrv4yabdfeom6z33jnhgnayydd3bywb failed
==> Warning: Skipping build of py-h5py-3.4.0-fvqppad3r7xmhrwo7vallgyinxrqczfh since py-numpy-1.21.3-f3kebfyeebnrwvomkrvsw2bhbh6uu5j7 failed
==> Warning: Skipping build of py-matplotlib-3.4.3-hys4x7mha3t2sruqxrrbirbr77zkqmmv since py-numpy-1.21.3-f3kebfyeebnrwvomkrvsw2bhbh6uu5j7 failed
==> Warning: Skipping build of py-numexpr-2.7.3-5h6onr27vjmkza6l3kamwusxjm6tnyui since py-numpy-1.21.3-f3kebfyeebnrwvomkrvsw2bhbh6uu5j7 failed
==> Fetching https://mirror.spack.io/_source-cache/archive/95/95ed6ab49a0ee001255eac4e44aacb5ca4ea96ba850c08337a3e4c9a0872ccd1.tar.gz
==> No patches needed for netcdf-cxx
==> netcdf-cxx: Executing phase: 'autoreconf'
==> netcdf-cxx: Executing phase: 'configure'
==> netcdf-cxx: Executing phase: 'build'
==> netcdf-cxx: Executing phase: 'install'
==> netcdf-cxx: Successfully installed netcdf-cxx-4.2-irrpfpb7qfox7dro3e7y6c6o5g2m2qrn
Fetch: 1.73s. Build: 4m 31.65s. Total: 4m 33.39s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/netcdf-cxx-4.2-irrpfpb7qfox7dro3e7y6c6o5g2m2qrn
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libsm-1.2.3-mbazk3gqcic3fb2aqpeeomq65qoyys4m
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libxext-1.3.3-hcgqaqoatemrgucdestrnsad7hnnoocx
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libxrender-0.9.10-hn27hcz6sqvglj6l6ti2nvmxspe7t5cl
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/flex-2.6.3-pefwrvzgcd6f4nkwmynv7ibzizsip6wk
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-setuptools-scm-6.3.2-rppopdcba4ldk6dxgrkt6o6un4yq7htj
==> Installing petsc-3.16.1-whp4gpqf32ayqf7f6j5tkjuio6y44dns
==> No binary for petsc-3.16.1-whp4gpqf32ayqf7f6j5tkjuio6y44dns found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/90/909cf7bce7b6a0ddb2580a1ac9502aa01631ec4105c716594c1804f0ee1ea06a.tar.gz
==> No patches needed for petsc
==> petsc: Executing phase: 'install'
==> Error: NoLibrariesError: Unable to recursively locate fujitsu-ssl2 libraries in /opt/FJSVxtclanga/tcsds-latest

/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/petsc/package.py:473, in install:
470 options.append(
471 '--with-{library}-lib={value}'.format(
472 library=petsclibname,
>> 473 value=spec[spacklibname].libs.joined())
474 )
475 else:
476 options.append(

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-petsc-3.16.1-whp4gpqf32ayqf7f6j5tkjuio6y44dns/spack-build-out.txt

==> Warning: Skipping build of damask-mesh-3.0.0-alpha5-zcfvtbuc3sihmdyi3q7ph5aujnry747h since petsc-3.16.1-whp4gpqf32ayqf7f6j5tkjuio6y44dns failed
==> Warning: Skipping build of damask-grid-3.0.0-alpha5-c7pxvoew3prwt3nr6d4g4r7pby3tezcf since petsc-3.16.1-whp4gpqf32ayqf7f6j5tkjuio6y44dns failed
==> Error: damask-3.0.0-alpha5-u6dgrob5aic7jrxygbnjfphuw7pbzex3: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libxt-1.1.5-3etyomn3lci3u45q7kvuygxhj5vbqx23
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libxrandr-1.5.0-yk4feq44tsgcs3h363naw4svo3b7kq2l
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-python-dateutil-2.8.2-47xpbgpsge4zr2jarbvsyc5uofvh3srv
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/xrandr-1.5.0-3q2glgh2ausa34tdgkpqnc7thofk5jve


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