List of Open Source Software which can be built on Fugaku
 |
Spack will be used to manage open source software packages on Fugaku.
Fugaku users can easily use pre-installed packages and built packages based on Spack recipes.
The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes.
Note that the results in this list do not guarantee that each package will work properly.
On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
|
dealii 9.3.1
| Compiler | Fujitsu Compiler 4.7.0 |
|---|---|
| Result | Dependency Error |
Failed Reason
Failed to install dependency package :
------------------------------------------------
ack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.
0/mpfr-4.1.0-lgxxsheprifg75vh4dowz2xxfiy23x4s/include -std=c++11 -
fPIC -D__extern_always_inline=inline -Wall -Wextra -Wno-unused-para
meter -O3 -funroll-loops -Wno-unknown-pragmas -fPIC -Wconversion -W
no-sign-conversion -Qunused-arguments -include /vol0003/rccs-sdt/a0
1008/spack-stage/spack-stage-symengine-0.7.0-45a5cpbgj5aelc7uwf5il2
ut6mfwhq32/spack-build-45a5cpb/symengine/cotire/symengine_CXX_prefi
x.hxx -MD -MT symengine/CMakeFiles/symengine.dir/expression.cpp.o -
MF CMakeFiles/symengine.dir/expression.cpp.o.d -o CMakeFiles/symeng
ine.dir/expression.cpp.o -c /home/rccs-sdt/a01008/spack-stage/spack
-stage-symengine-0.7.0-45a5cpbgj5aelc7uwf5il2ut6mfwhq32/spack-src/s
ymengine/expression.cpp
255 [ 19%] Building CXX object symengine/CMakeFiles/symengine.dir/field
s.cpp.o
256 cd /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-symengine-0.7.0
-45a5cpbgj5aelc7uwf5il2ut6mfwhq32/spack-build-45a5cpb/symengine &&
/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spac
k/env/fj/case-insensitive/FCC -Dsymengine_EXPORTS -I/home/rccs-sdt/
a01008/spack-stage/spack-stage-symengine-0.7.0-45a5cpbgj5aelc7uwf5i
l2ut6mfwhq32/spack-src -I/vol0003/rccs-sdt/a01008/spack-stage/spack
-stage-symengine-0.7.0-45a5cpbgj5aelc7uwf5il2ut6mfwhq32/spack-build
-45a5cpb -isystem /vol0003/rccs-sdt/a01008/spack-all-test/env-20220
225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/mpc-1.1.0-bot5aud5sa
xgm37a5f6ripdb2yvwoei3/include -isystem /vol0003/rccs-sdt/a01008/sp
ack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.
0/mpfr-4.1.0-lgxxsheprifg75vh4dowz2xxfiy23x4s/include -std=c++11 -
fPIC -D__extern_always_inline=inline -Wall -Wextra -Wno-unused-para
meter -O3 -funroll-loops -Wno-unknown-pragmas -fPIC -Wconversion -W
no-sign-conversion -Qunused-arguments -include /vol0003/rccs-sdt/a0
1008/spack-stage/spack-stage-symengine-0.7.0-45a5cpbgj5aelc7uwf5il2
ut6mfwhq32/spack-build-45a5cpb/symengine/cotire/symengine_CXX_prefi
x.hxx -MD -MT symengine/CMakeFiles/symengine.dir/fields.cpp.o -MF C
MakeFiles/symengine.dir/fields.cpp.o.d -o CMakeFiles/symengine.dir/
fields.cpp.o -c /home/rccs-sdt/a01008/spack-stage/spack-stage-symen
gine-0.7.0-45a5cpbgj5aelc7uwf5il2ut6mfwhq32/spack-src/symengine/fie
lds.cpp
257 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
258 1 error generated.
>> 259 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:100: sy
mengine/CMakeFiles/symengine.dir/add.cpp.o] Error 1
260 make[2]: *** Waiting for unfinished jobs....
261 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
262 1 error generated.
263 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
>> 264 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:115: sy
mengine/CMakeFiles/symengine.dir/basic.cpp.o] Error 1
265 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
266 1 error generated.
>> 267 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:130: sy
mengine/CMakeFiles/symengine.dir/complex.cpp.o] Error 1
268 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
269 1 error generated.
>> 270 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:145: sy
mengine/CMakeFiles/symengine.dir/complex_double.cpp.o] Error 1
271 1 error generated.
>> 272 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:160: sy
mengine/CMakeFiles/symengine.dir/constants.cpp.o] Error 1
273 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
274 1 error generated.
>> 275 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:175: sy
mengine/CMakeFiles/symengine.dir/cse.cpp.o] Error 1
276 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
277 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
278 1 error generated.
279 1 error generated.
>> 280 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:205: sy
mengine/CMakeFiles/symengine.dir/dense_matrix.cpp.o] Error 1
>> 281 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:190: sy
mengine/CMakeFiles/symengine.dir/cwrapper.cpp.o] Error 1
282 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
283 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
284 1 error generated.
285 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
286 1 error generated.
>> 287 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:220: sy
mengine/CMakeFiles/symengine.dir/derivative.cpp.o] Error 1
>> 288 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:235: sy
mengine/CMakeFiles/symengine.dir/dict.cpp.o] Error 1
289 1 error generated.
290 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
>> 291 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:250: sy
mengine/CMakeFiles/symengine.dir/diophantine.cpp.o] Error 1
292 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
293 1 error generated.
>> 294 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:265: sy
mengine/CMakeFiles/symengine.dir/eval.cpp.o] Error 1
295 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
296 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
297 fatal error: malformed or corrupted AST file: 'Corrupted AST file'
298 1 error generated.
>> 299 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:280: sy
mengine/CMakeFiles/symengine.dir/eval_double.cpp.o] Error 1
300 1 error generated.
301 1 error generated.
302 1 error generated.
>> 303 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:295: sy
mengine/CMakeFiles/symengine.dir/expand.cpp.o] Error 1
>> 304 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:310: sy
mengine/CMakeFiles/symengine.dir/expression.cpp.o] Error 1
>> 305 make[2]: *** [symengine/CMakeFiles/symengine.dir/build.make:325: sy
mengine/CMakeFiles/symengine.dir/fields.cpp.o] Error 1
306 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-symengine-0.7.0-45a5cpbgj5aelc7uwf5il2ut6mfwhq32/spack-bu
ild-45a5cpb'
>> 307 make[1]: *** [CMakeFiles/Makefile2:205: symengine/CMakeFiles/symeng
ine.dir/all] Error 2
308 make[1]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-symengine-0.7.0-45a5cpbgj5aelc7uwf5il2ut6mfwhq32/spack-bu
ild-45a5cpb'
309 make: *** [Makefile:149: all] Error 2
See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-symengine-0.7.0-45a5cpbgj5aelc7uwf5il2ut6mfwhq32/spack-build-out.txt
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/scotch-6.1.1-5vxpc5dws6r7li6g2zwyyvvxald4b6h4
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libxt-1.1.5-vxkul3hmlkr33axn6q5oknimi7othagb
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libxrandr-1.5.0-yk4feq44tsgcs3h363naw4svo3b7kq2l
==> Installing petsc-3.16.1-whp4gpqf32ayqf7f6j5tkjuio6y44dns
==> No binary for petsc-3.16.1-whp4gpqf32ayqf7f6j5tkjuio6y44dns found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/90/909cf7bce7b6a0ddb2580a1ac9502aa01631ec4105c716594c1804f0ee1ea06a.tar.gz
==> No patches needed for petsc
==> petsc: Executing phase: 'install'
==> Error: NoLibrariesError: Unable to recursively locate fujitsu-ssl2 libraries in /opt/FJSVxtclanga/tcsds-latest
/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/petsc/package.py:473, in install:
470 options.append(
471 '--with-{library}-lib={value}'.format(
472 library=petsclibname,
>> 473 value=spec[spacklibname].libs.joined())
474 )
475 else:
476 options.append(
See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-petsc-3.16.1-whp4gpqf32ayqf7f6j5tkjuio6y44dns/spack-build-out.txt
==> Installing mmg-5.5.2-mzq2ntmdzw73c3nqrgdjcziknoygbans
==> No binary for mmg-5.5.2-mzq2ntmdzw73c3nqrgdjcziknoygbans found: installing from source
==> Warning: Skipping build of slepc-3.16.0-rn25xcacgx52eijall4vkm4einmg4vap since petsc-3.16.1-whp4gpqf32ayqf7f6j5tkjuio6y44dns failed
==> Fetching https://mirror.spack.io/_source-cache/archive/58/58e3b866101e6f0686758e16bcf9fb5fb06c85184533fc5054ef1c8adfd4be73.tar.gz
==> No patches needed for mmg
==> mmg: Executing phase: 'cmake'
==> mmg: Executing phase: 'build'
==> mmg: Executing phase: 'install'
==> mmg: Successfully installed mmg-5.5.2-mzq2ntmdzw73c3nqrgdjcziknoygbans
Fetch: 1.67s. Build: 11m 46.77s. Total: 11m 48.44s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/mmg-5.5.2-mzq2ntmdzw73c3nqrgdjcziknoygbans
==> Error: dealii-9.3.1-2pzksw3dubn7bfjd3b7t2r5v3j2xgiqm: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/xrandr-1.5.0-3q2glgh2ausa34tdgkpqnc7thofk5jve
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