List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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dire 2.004

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /usr (external bzip2-1.0.6-pkyqs6czmr636ktska3fpjek77reodry)
[+] /usr (external zlib-1.2.11-o3hvygtdcp6vg3bpvsrurq4hgklwtype)
[+] /usr (external ncurses-6.1-qbvus6vwvtyxe33hxq4hbpazkrpy6ctb)
[+] /usr (external autoconf-2.69-me3qacnq6as2fvkhuiia2ks5udajax3b)
[+] /usr (external automake-1.16.1-gbketv7wv244mk5mkf65hyjxew4yocxo)
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/gnuconfig-2021-08-14-ezyvb3gy7i726n45kwb44a4vxle3if3i
[+] /usr (external libtool-2.4.6-snb3wjzerg4q7w57akrhqlg2hfvalawy)
[+] /usr (external m4-1.4.18-zz6lq3qkexluljpiw5yxqyozzhkijvpn)
[+] /vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj (external python-3.9.9-3wcip6atrybofsb566d7pjqwhl76u4dp)
[+] /usr (external popt-1.18-tuw5oozapvl6mofyty6dx6acouoxx2ob)
==> Installing boost-1.77.0-tfuifjz2phadvkgys7c237zb3uj4noi5
==> No binary for boost-1.77.0-tfuifjz2phadvkgys7c237zb3uj4noi5 found: installing from source
==> Warning: using "pythia8@8.244" which is a deprecated version
1 out of 1 hunk FAILED -- saving rejects to file tools/build/src/tools/clang-linux.jam.rej
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/fc/fc9f85fc030e233142908241af7a846e60630aa7388de9a5fafb1f3a26840854.tar.bz2
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/93/93f4aad8f88d1437e50d95a2d066390ef3753b99ef5de24f7a46bc083bd6df06
==> Patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/boost/fujitsu_version_analysis.patch failed.
==> Error: ProcessError: Command exited with status 1:
'/usr/bin/patch' '-s' '-p' '1' '-i' '/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/boost/fujitsu_version_analysis.patch' '-d' '.'
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/cmake-3.21.4-vgsk3aw6j4szlnkzjz3u57u7qtoosnkz
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-setuptools-58.2.0-nwtt7d5cczfaezzecmrcr4swo63tvrg2
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/rsync-3.1.3-3siqsq3wbxj27wh27a7y33kpzs5s2x2q
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/hepmc3-3.2.4-ahqqvkstsaewu2xbnbrh2oldtv5erguo
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/hepmc-2.06.11-zecwr44evhgkqd32pulxa7vgbkfmvpjm
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-cython-0.29.24-rmuycsh3hdsfbp3ffdahdadzgeju5kfs
==> Installing pythia8-8.244-adk4ommo7uz4gbfwqwhxnq5u7v5nvlx3
==> No binary for pythia8-8.244-adk4ommo7uz4gbfwqwhxnq5u7v5nvlx3 found: installing from source
==> Warning: Skipping build of dire-2.004-ar6v2h4gd2oxboqem2t2olskyvb7rpcj since boost-1.77.0-tfuifjz2phadvkgys7c237zb3uj4noi5 failed
==> Warning: pythia8@8.244 is deprecated and may be removed in a future Spack release.
==> Error: FetchError: Will not fetch pythia8@8.244
If you are willing to be a maintainer for this version of the package, submit a PR to remove `deprecated=False`, or use `--deprecated` to skip this check.

/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spack/spack/package.py:1382, in do_fetch:
1379 dp_msg))
1380
1381 if not ignore_deprecation:
>> 1382 raise FetchError("Will not fetch {0}".format(
1383 self.spec.format('{name}{@version}')), dp_msg)
1384
1385 self.stage.create()

==> Installing lhapdf-6.3.0-tsr6fnt6bvbdvu2staenwgpop3qdfruz
==> No binary for lhapdf-6.3.0-tsr6fnt6bvbdvu2staenwgpop3qdfruz found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/ed/ed4d8772b7e6be26d1a7682a13c87338d67821847aa1640d78d67d2cef8b9b5d.tar.gz
==> No patches needed for lhapdf
==> lhapdf: Executing phase: 'autoreconf'
==> lhapdf: Executing phase: 'configure'
==> lhapdf: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'

3 errors found in build log:
97 checking how to hardcode library paths into programs... immediate
98 configure: Building LHAGLUE Fortran wrappers
99 configure: Building LHAGLUE C++ wrappers
100 checking for pdflatex... no
101 checking for doxygen... no
102 checking for python... /usr/bin/python
>> 103 Fatal Python error: Py_Initialize: Unable to get the locale encodin
g
104 ModuleNotFoundError: No module named 'encodings'
105
106 Current thread 0x0000400000045990 (most recent call first):
>> 107 Fatal Python error: Py_Initialize: Unable to get the locale encodin
g
108 ModuleNotFoundError: No module named 'encodings'
109
110 Current thread 0x0000400000045990 (most recent call first):
111 checking for python version... Fatal Python error: Py_Initialize: U
nable to get the locale encoding
112 ModuleNotFoundError: No module named 'encodings'
113

...

456 build="$(basename $i)"; \
457 if [ ! -e ${build} ]; then cp ${orig} ${build}; \
458 echo ${build} >> fix-out-of-source; fi; \
459 done
460 touch fix-out-of-source
461 CC="/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/
spack/env/fj/case-insensitive/FCC" CXX="/vol0003/rccs-sdt/a01008/sp
ack-all-test/env-20220225/spack/lib/spack/env/fj/case-insensitive/F
CC" CFLAGS="-O3" CXXFLAGS="-O3" /usr/bin/python setup.py install --
install-lib=build/ --force
>> 462 Fatal Python error: Py_Initialize: Unable to get the locale encodin
g
463 ModuleNotFoundError: No module named 'encodings'
464
465 Current thread 0x0000400000045990 (most recent call first):
466 make[2]: *** [Makefile:485: all-local] Aborted
467 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-lhapdf-6.3.0-tsr6fnt6bvbdvu2staenwgpop3qdfruz/spack-src/w
rappers/python'
468 make[1]: *** [Makefile:376: all-recursive] Error 1

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-lhapdf-6.3.0-tsr6fnt6bvbdvu2staenwgpop3qdfruz/spack-build-out.txt

==> Error: dire-2.004-ar6v2h4gd2oxboqem2t2olskyvb7rpcj: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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