Failed Reason

Failed to install dependency package :
------------------------------------------------
ence to `hwloc_bitmap_last'
>> 49 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_get_depth_type'
>> 50 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_bitmap_list_asprintf'
>> 51 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_obj_type_snprintf'
>> 52 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_bitmap_set'
>> 53 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_bitmap_isset'
>> 54 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_set_cpubind'
>> 55 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_bitmap_or'
>> 56 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_topology_set_xmlbuffer'
>> 57 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_bitmap_zero'
>> 58 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_topology_init'
>> 59 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_bitmap_snprintf'
>> 60 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_set_membind'
>> 61 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_topology_load'
>> 62 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_bitmap_list_sscanf'
>> 63 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_topology_get_support'
>> 64 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_bitmap_isincluded'
>> 65 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_get_nbobjs_by_depth'
>> 66 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_set_area_membind'
>> 67 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_topology_export_xmlbuffer'
>> 68 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_topology_destroy'
>> 69 /opt/FJSVxtclanga/tcsds-1.2.30a/lib64/libmpi.so: undefined refer
ence to `hwloc_bitmap_next'
>> 70 clang-7: error: linker command failed with exit code 1 (use -v t
o see invocation)
>> 71 gmake[1]: *** [CMakeFiles/cmTC_8a094.dir/build.make:100: cmTC_8a
094] Error 1
72 gmake[1]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stag
e/spack-stage-hdf5-1.10.7-ctdiqr54w2fonglui43owvgp633lniky/spack-bui
ld-ctdiqr5/CMakeFiles/CMakeTmp'
73 gmake: *** [Makefile:127: cmTC_8a094/fast] Error 2
74
75
76
77

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-hdf5-1.10.7-ctdiqr54w2fonglui43owvgp633lniky/spack-build-out.txt

[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/eigen-3.4.0-e7wcgbdlufc4qo4cfhowtlgol2vweytr
==> Installing metis-5.1.0-hl46xtbddaptmj3pqep4mfuespeuiio7
==> No binary for metis-5.1.0-hl46xtbddaptmj3pqep4mfuespeuiio7 found: installing from source
==> Warning: Skipping build of petsc-3.16.1-2bjzqcutuh2q4nfftv7vlegzrmslcqvf since hdf5-1.10.7-ctdiqr54w2fonglui43owvgp633lniky failed
==> Warning: Skipping build of slepc-3.16.0-tjbpwjqjwszncvdp5agbzb7i23qlbzeg since petsc-3.16.1-2bjzqcutuh2q4nfftv7vlegzrmslcqvf failed
==> Warning: Skipping build of py-petsc4py-3.16.1-zyhzosauyz6ik5e7od566elrhv64icgl since petsc-3.16.1-2bjzqcutuh2q4nfftv7vlegzrmslcqvf failed
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/76/76faebe03f6c963127dbb73c13eab58c9a3faeae48779f049066a21c087c5db2.tar.gz
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/metis/install_gklib_defs_rename.patch
==> Ran patch() for metis
==> metis: Executing phase: 'install'
==> metis: Successfully installed metis-5.1.0-hl46xtbddaptmj3pqep4mfuespeuiio7
Fetch: 0.08s. Build: 6m 23.90s. Total: 6m 23.99s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/metis-5.1.0-hl46xtbddaptmj3pqep4mfuespeuiio7
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/diffutils-3.8-c3z2qrsurl5l57yct4kuz2mxjyjywwgz
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-cython-0.29.24-rmuycsh3hdsfbp3ffdahdadzgeju5kfs
==> Installing py-pybind11-2.2.4-ee5jlzlng3iwomniqppesplovpabislc
==> No binary for py-pybind11-2.2.4-ee5jlzlng3iwomniqppesplovpabislc found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/b6/b69e83658513215b8d1443544d0549b7d231b9f201f6fc787a2b2218b408181e.tar.gz
==> Ran patch() for py-pybind11
==> py-pybind11: Executing phase: 'cmake'
==> py-pybind11: Executing phase: 'build'
==> py-pybind11: Executing phase: 'install'
==> py-pybind11: Successfully installed py-pybind11-2.2.4-ee5jlzlng3iwomniqppesplovpabislc
Fetch: 1.75s. Build: 1m 24.53s. Total: 1m 26.27s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pybind11-2.2.4-ee5jlzlng3iwomniqppesplovpabislc
==> Installing py-mpi4py-3.1.2-j5voqsmb34nhvmkddhymdb564i6jzlcu
==> No binary for py-mpi4py-3.1.2-j5voqsmb34nhvmkddhymdb564i6jzlcu found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/40/40dd546bece8f63e1131c3ceaa7c18f8e8e93191a762cd446a8cfcf7f9cce770.tar.gz
==> No patches needed for py-mpi4py
==> py-mpi4py: Executing phase: 'build'
==> py-mpi4py: Executing phase: 'install'
==> py-mpi4py: Successfully installed py-mpi4py-3.1.2-j5voqsmb34nhvmkddhymdb564i6jzlcu
Fetch: 0.09s. Build: 13m 7.56s. Total: 13m 7.66s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-mpi4py-3.1.2-j5voqsmb34nhvmkddhymdb564i6jzlcu
==> Installing py-sympy-1.8-boefngnmvmhzwu54a2nt3iyvn33hqxnb
==> No binary for py-sympy-1.8-boefngnmvmhzwu54a2nt3iyvn33hqxnb found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/1c/1ca588a9f6ce6a323c5592f9635159c2093572826668a1022c75c75bdf0297cb.tar.gz
==> No patches needed for py-sympy
==> py-sympy: Executing phase: 'build'
==> py-sympy: Executing phase: 'install'
==> py-sympy: Successfully installed py-sympy-1.8-boefngnmvmhzwu54a2nt3iyvn33hqxnb
Fetch: 2.25s. Build: 3m 50.81s. Total: 3m 53.07s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-sympy-1.8-boefngnmvmhzwu54a2nt3iyvn33hqxnb
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/mpfr-4.1.0-lgxxsheprifg75vh4dowz2xxfiy23x4s
==> Installing parmetis-4.0.3-sqpu6acwavl3uwj3xrgupabbqc6pw3mj
==> No binary for parmetis-4.0.3-sqpu6acwavl3uwj3xrgupabbqc6pw3mj found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/f2/f2d9a231b7cf97f1fee6e8c9663113ebf6c240d407d3c118c55b3633d6be6e5f.tar.gz
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/parmetis/enable_external_metis.patch
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/parmetis/pkg-parmetis-1c1a9fd0f408dc4d42c57f5c3ee6ace411eb222b.patch
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/parmetis/pkg-parmetis-82409d68aa1d6cbc70740d0f35024aae17f7d5cb.patch
==> parmetis: Executing phase: 'cmake'
==> parmetis: Executing phase: 'build'
==> parmetis: Executing phase: 'install'
==> parmetis: Successfully installed parmetis-4.0.3-sqpu6acwavl3uwj3xrgupabbqc6pw3mj
Fetch: 0.12s. Build: 4m 50.70s. Total: 4m 50.82s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/parmetis-4.0.3-sqpu6acwavl3uwj3xrgupabbqc6pw3mj
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/bison-3.8.2-ta2ecl7xyo4uznxun3zvhbitdklgbcck
==> Installing suite-sparse-5.10.1-ztmkpnbglgpslx3cek3yla57b624ta6f
==> No binary for suite-sparse-5.10.1-ztmkpnbglgpslx3cek3yla57b624ta6f found: installing from source
==> Warning: py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh failed to install
==> Warning: Skipping build of py-fenics-fiat-2019.1.0-op5gzbxwncybvj6jzqmbdmwxmr2alk4f since py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh failed
==> Warning: Skipping build of py-fenics-ffc-2019.1.0.post0-m2urfpok6l3u3tgtnov4ukvnpwqf7jez since py-fenics-fiat-2019.1.0-op5gzbxwncybvj6jzqmbdmwxmr2alk4f failed
==> Warning: Skipping build of py-fenics-dijitso-2019.1.0-73h3cqeet3s635d7xkpxmi5zvevdv2cz since py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh failed
==> Warning: Skipping build of py-fenics-ufl-2019.1.0-f4n4x3wbwyxdkdwa6zhk3d4kcer5rsny since py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh failed
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/ac/acb4d1045f48a237e70294b950153e48dce5b5f9ca8190e86c2b8c54ce00a7ee.tar.gz
==> No patches needed for suite-sparse
==> suite-sparse: Executing phase: 'install'
==> suite-sparse: Successfully installed suite-sparse-5.10.1-ztmkpnbglgpslx3cek3yla57b624ta6f
Fetch: 0.70s. Build: 4h 16m 25.56s. Total: 4h 16m 26.26s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/suite-sparse-5.10.1-ztmkpnbglgpslx3cek3yla57b624ta6f
==> Installing superlu-dist-7.1.1-wg5ldthkth5ydfqdfewcwjieqfj2yl6b
==> No binary for superlu-dist-7.1.1-wg5ldthkth5ydfqdfewcwjieqfj2yl6b found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/55/558053b3d4a56eb661c4f04d4fcab6604018ce5db97115394c161b56c9c278ff.tar.gz
==> No patches needed for superlu-dist
==> superlu-dist: Executing phase: 'cmake'
==> superlu-dist: Executing phase: 'build'
==> superlu-dist: Executing phase: 'install'
==> superlu-dist: Successfully installed superlu-dist-7.1.1-wg5ldthkth5ydfqdfewcwjieqfj2yl6b
Fetch: 0.07s. Build: 10m 28.75s. Total: 10m 28.82s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/superlu-dist-7.1.1-wg5ldthkth5ydfqdfewcwjieqfj2yl6b
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/flex-2.6.4-xavzxonrwetpmb6ddw2vooarmwsqjtme
==> Installing scotch-6.1.1-jsbtaxxo2waj7yidj3rbssofumn5op4g
==> No binary for scotch-6.1.1-jsbtaxxo2waj7yidj3rbssofumn5op4g found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/39/39052f59ff474a4a69cefc25cf3caf8429400889deba010ee6403ca188f8b311.tar.gz
==> Ran patch() for scotch
==> scotch: Executing phase: 'install'
==> scotch: Successfully installed scotch-6.1.1-jsbtaxxo2waj7yidj3rbssofumn5op4g
Fetch: 0.12s. Build: 5m 5.41s. Total: 5m 5.53s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/scotch-6.1.1-jsbtaxxo2waj7yidj3rbssofumn5op4g
==> Error: fenics-2019.1.0.post0-6xxbqvfh57iv4vpehzrw7zbzmv57ykoe: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).