List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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fenics-basix 0.3.0

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /usr (external ncurses-6.1-qbvus6vwvtyxe33hxq4hbpazkrpy6ctb)
[+] /opt/FJSVxtclanga/tcsds-latest (external fujitsu-ssl2-head-qa7iyj5emttingfmlg3424h3vekiviw3)
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/cmake-3.21.4-vgsk3aw6j4szlnkzjz3u57u7qtoosnkz
==> Installing xtl-0.7.2-w3whhqsjgnhvk6garyvlnkqdswqpnxtq
==> No binary for xtl-0.7.2-w3whhqsjgnhvk6garyvlnkqdswqpnxtq found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/95/95c221bdc6eaba592878090916383e5b9390a076828552256693d5d97f78357c.tar.gz
==> No patches needed for xtl
==> xtl: Executing phase: 'cmake'
==> xtl: Executing phase: 'build'
==> xtl: Executing phase: 'install'
==> xtl: Successfully installed xtl-0.7.2-w3whhqsjgnhvk6garyvlnkqdswqpnxtq
Fetch: 0.61s. Build: 11.80s. Total: 12.41s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/xtl-0.7.2-w3whhqsjgnhvk6garyvlnkqdswqpnxtq
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/intel-tbb-2020.3-7babpk2kuh5ydo4vmbilzrnkzcz4pxdq
==> Installing xsimd-7.5.0-zywjqrwlhyjg5ja5faskjwrhx7z2flpm
==> No binary for xsimd-7.5.0-zywjqrwlhyjg5ja5faskjwrhx7z2flpm found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/45/45337317c7f238fe0d64bb5d5418d264a427efc53400ddf8e6a964b6bcb31ce9.tar.gz
==> No patches needed for xsimd
==> xsimd: Executing phase: 'cmake'
==> xsimd: Executing phase: 'build'
==> xsimd: Executing phase: 'install'
==> xsimd: Successfully installed xsimd-7.5.0-zywjqrwlhyjg5ja5faskjwrhx7z2flpm
Fetch: 0.62s. Build: 12.84s. Total: 13.46s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/xsimd-7.5.0-zywjqrwlhyjg5ja5faskjwrhx7z2flpm
==> Installing xtensor-0.23.10-a2jyxpflrd77laudezw4b4w2qdzvctkk
==> No binary for xtensor-0.23.10-a2jyxpflrd77laudezw4b4w2qdzvctkk found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/2e/2e770a6d636962eedc868fef4930b919e26efe783cd5d8732c11e14cf72d871c.tar.gz
==> No patches needed for xtensor
==> xtensor: Executing phase: 'cmake'
==> xtensor: Executing phase: 'build'
==> xtensor: Executing phase: 'install'
==> xtensor: Successfully installed xtensor-0.23.10-a2jyxpflrd77laudezw4b4w2qdzvctkk
Fetch: 0.64s. Build: 17.80s. Total: 18.44s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/xtensor-0.23.10-a2jyxpflrd77laudezw4b4w2qdzvctkk
==> Installing fenics-basix-0.3.0-ggqgdusmt3gqw6t44o3jxxoqkzjik533
==> No binary for fenics-basix-0.3.0-ggqgdusmt3gqw6t44o3jxxoqkzjik533 found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/9b/9b148fd2a5485c94011fc6ca977ebdef0e51782a62b3654fc044f35b60e2bd07.tar.gz
==> No patches needed for fenics-basix
==> fenics-basix: Executing phase: 'cmake'
==> fenics-basix: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16'

4 errors found in build log:
214 /usr/bin/ld: /opt/FJSVxtclanga/tcsds-latest/lib64/libssl2mtsve.a(xl
_erbla.o): relocation R_AARCH64_MOVW_UABS_G0_NC against `a local sy
mbol' can not be used when making a shared object; recompile with -
fPIC
215 /usr/bin/ld: /opt/FJSVxtclanga/tcsds-latest/lib64/libssl2mtsve.a(do
rm2l.o): relocation R_AARCH64_MOVW_UABS_G0_NC against `a local symb
ol' can not be used when making a shared object; recompile with -fP
IC
216 /usr/bin/ld: CMakeFiles/basix.dir/cpp/basix/finite-element.cpp.o(.d
ebug_info+0x96af2): R_AARCH64_ABS64 used with TLS symbol _ZZN2xt6de
tail23flat_expression_adaptorINS_5xviewIRKNS2_IRKNS_17xtensor_conta
inerINS_7uvectorIdSaIdEEELm3ELNS_11layout_typeE1ENS_22xtensor_expre
ssion_tagEEEJmNS_4xallImEESD_EEEJKlSD_EEELS7_1EE9get_indexEvE5index
217 /usr/bin/ld: CMakeFiles/basix.dir/cpp/basix/finite-element.cpp.o(.d
ebug_info+0x96f19): R_AARCH64_ABS64 used with TLS symbol _ZZN2xt6de
tail23flat_expression_adaptorINS_5xviewIRNS2_IRNS_17xtensor_contain
erINS_7uvectorIdSaIdEEELm3ELNS_11layout_typeE1ENS_22xtensor_express
ion_tagEEEJmNS_4xallImEESC_EEEJKlSC_EEELS7_1EE9get_indexEvE5index
218 /usr/bin/ld: CMakeFiles/basix.dir/cpp/basix/moments.cpp.o(.debug_in
fo+0xa0382): R_AARCH64_ABS64 used with TLS symbol _ZZN2xt6detail23f
lat_expression_adaptorINS_9xfunctionINS0_5minusEJNS_7xscalarIdEERKN
S_16xarray_containerINS_7uvectorIdSaIdEEELNS_11layout_typeE1ENS_7sv
ectorImLm4ESaImELb1EEENS_22xtensor_expression_tagEEEEEELSA_1EE9get_
indexEvE5index
219 /usr/bin/ld: /opt/FJSVxtclanga/tcsds-latest/lib64/libssl2mtsve.a(cb
las_xerbla.o)(.text+0x330): unresolvable R_AARCH64_MOVW_UABS_G0_NC
relocation against symbol `stderr@@GLIBC_2.17'
>> 220 /usr/bin/ld: final link failed: Nonrepresentable section on output
>> 221 clang-7: error: linker command failed with exit code 1 (use -v to s
ee invocation)
>> 222 make[2]: *** [CMakeFiles/basix.dir/build.make:404: libbasix.so] Err
or 1
223 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-fenics-basix-0.3.0-ggqgdusmt3gqw6t44o3jxxoqkzjik533/spack
-build-ggqgdus'
>> 224 make[1]: *** [CMakeFiles/Makefile2:103: CMakeFiles/basix.dir/all] E
rror 2
225 make[1]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-fenics-basix-0.3.0-ggqgdusmt3gqw6t44o3jxxoqkzjik533/spack
-build-ggqgdus'
226 make: *** [Makefile:139: all] Error 2

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-fenics-basix-0.3.0-ggqgdusmt3gqw6t44o3jxxoqkzjik533/spack-build-out.txt


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