List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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freefem 4.9

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/gnuconfig-2021-08-14-ezyvb3gy7i726n45kwb44a4vxle3if3i
==> Installing freefem-4.9-tedly3aufvx4dhjcah7nhb73542s7n5o
==> No binary for freefem-4.9-tedly3aufvx4dhjcah7nhb73542s7n5o found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/29/299ba2b73dfff578b7890f693c1e835680bf55eba87263cabd60d81909e1e0e4.tar.gz
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/freefem/acmpi.patch
==> freefem: Executing phase: 'autoreconf'
==> freefem: Executing phase: 'configure'
==> freefem: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'

8 errors found in build log:
9 configure.ac:1110: warning: file `etc/config/m4/acmpi.m4' included
several times
10 configure.ac:1185: warning: file `etc/config/m4/acmpi.m4' included
several times
11 configure.ac:1110: warning: file `etc/config/m4/acmpi.m4' included
several times
12 configure.ac:1185: warning: file `etc/config/m4/acmpi.m4' included
several times
13 configure.ac:1110: warning: file `etc/config/m4/acmpi.m4' included
several times
14 configure.ac:1185: warning: file `etc/config/m4/acmpi.m4' included
several times
>> 15 configure.ac:198: installing './compile'
>> 16 configure.ac:297: installing './config.guess'
>> 17 configure.ac:297: installing './config.sub'
>> 18 configure.ac:34: installing './install-sh'
>> 19 configure.ac:34: installing './missing'
20 parallel-tests: installing './test-driver'
21 plugin/seq/Makefile.am: installing './depcomp'
22 ==> freefem: Executing phase: 'configure'
23 ==> [2022-03-01-23:00:53.314923] '/home/rccs-sdt/a01008/spack-stag
e/spack-stage-freefem-4.9-tedly3aufvx4dhjcah7nhb73542s7n5o/spack-s
rc/configure' '--prefix=/vol0003/rccs-sdt/a01008/spack-all-test/en
v-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/freefem-4.9-
tedly3aufvx4dhjcah7nhb73542s7n5o' '--disable-mkl' 'CFLAGS=' 'FFLAG
S=' 'CXXFLAGS=' '--without-petsc' '--without-slepc'
24 configure: WARNING: unrecognized options: --without-slepc
25 checking for a BSD-compatible install... /usr/bin/install -c

...

1321 config.status: creating ff-get-dep
1322 chmod a+x ff-pkg-download
1323 chmod a+x load.link
1324 chmod a+x ff-get-dep
1325 cp ff-pkg-download ../../3rdparty/bin
1326 if [ -d ../../3rdparty/bin ] ;then cp ff-get-dep ../../3rdparty/bi
n; fi
>> 1327 diff: WHERE_LIBRARY-download: No such file or directory
1328 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spa
ck/env/fj/fcc -DNDEBUG -O3 -fPIC ffmaster.c libff-mmap-semaphore.o
-o ffmaster \
1329 `awk -f ff-get-dep.awk -v libs="[pthread-google|pthread]" WHERE_LI
BRARY-download WHERE_LIBRARY-config`
1330 ../../config.status --file=ff-c++:load.link.in
1331 touch include.done
1332 config.status: creating ff-c++
1333 chmod a+x ff-c++

...

1620 bool isbigendian() { uint8_t i=1,ii = (i <<8);return ii!=256;}
1621 ~~^ ~~~
1622
1623 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spa
ck/env/fj/case-insensitive/FCC -shared -fPIC -DNDEBUG -O3 -std=c++
14 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC 'BEC.o' -o BEC.so
1624 eval ./ff-c++ Curvature.cpp -L/vol0003/rccs-sdt/a01008/spack-stage
/spack-stage-freefem-4.9-tedly3aufvx4dhjcah7nhb73542s7n5o/spack-sr
c/3rdparty/lib -lMesh -I/vol0003/rccs-sdt/a01008/spack-stage/spack
-stage-freefem-4.9-tedly3aufvx4dhjcah7nhb73542s7n5o/spack-src/3rdp
arty/include/libMesh
1625 eval ./ff-c++ Element_P1bl.cpp
>> 1626 /usr/bin/ld: cannot find -llapack
>> 1627 clang-7: error: linker command failed with exit code 1 (use -v to
see invocation)
1628 make[4]: *** [Makefile:895: Element_Mixte.so] Error 1
1629 make[4]: *** Waiting for unfinished jobs....
1630 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spa
ck/env/fj/case-insensitive/FCC -c -fPIC '-I./include' '-I/vol0003/
rccs-sdt/a01008/spack-stage/spack-stage-freefem-4.9-tedly3aufvx4dh
jcah7nhb73542s7n5o/spack-src/3rdparty/include/libMesh' -DNDEBUG -O
3 -std=c++14 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC 'Curvature.cpp'
1631 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spa
ck/env/fj/case-insensitive/FCC -c -fPIC '-I./include' -DNDEBUG -O3
-std=c++14 -DBAMG_LONG_LONG -DNCHECKPTR -fPIC 'Element_P1bl.cpp'
1632 eval ./ff-c++ Element_QF.cpp
1633

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-freefem-4.9-tedly3aufvx4dhjcah7nhb73542s7n5o/spack-build-out.txt


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