List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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gengeo 163

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /usr (external autoconf-2.69-me3qacnq6as2fvkhuiia2ks5udajax3b)
[+] /usr (external automake-1.16.1-gbketv7wv244mk5mkf65hyjxew4yocxo)
[+] /usr (external bzip2-1.0.6-pkyqs6czmr636ktska3fpjek77reodry)
[+] /vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj (external python-3.9.9-3wcip6atrybofsb566d7pjqwhl76u4dp)
[+] /usr (external zlib-1.2.11-o3hvygtdcp6vg3bpvsrurq4hgklwtype)
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/gnuconfig-2021-08-14-ezyvb3gy7i726n45kwb44a4vxle3if3i
[+] /usr (external libtool-2.4.6-snb3wjzerg4q7w57akrhqlg2hfvalawy)
[+] /usr (external m4-1.4.18-zz6lq3qkexluljpiw5yxqyozzhkijvpn)
[+] /usr (external hwloc-2.2.0-rmis2olps5il7dl7dva6guws6hdyyqjt)
[+] /usr (external libevent-2.1.8-4hzh2nw7o4xnki7pl6sejvrgsk4eqesg)
[+] /usr (external numactl-2.0.12-qx3wztjfpiy4ddss4eeyowibeneb767k)
[+] /usr (external libedit-3.1-4g37s3varkd6d47tgjpdwabtxqwda66j)
[+] /usr (external ncurses-6.1-qbvus6vwvtyxe33hxq4hbpazkrpy6ctb)
[+] /usr (external openssl-1.1.1g-dqzlhh5x3gd54fdshnsmluwmtatw7u6k)
[+] /usr (external perl-5.26.3-cfeod657avcbjzlstrxizeulrdfnqb3r)
[+] /usr (external pkgconf-1.4.2-x2r3t6jrikcoqgyvulfa2xm3cgearc2z)
==> Installing boost-1.77.0-gvyu5cujfwazqsvt7u2y5sooput35q4o
==> No binary for boost-1.77.0-gvyu5cujfwazqsvt7u2y5sooput35q4o found: installing from source
==> Warning: using "openssl@1.1.1g" which is a deprecated version
1 out of 1 hunk FAILED -- saving rejects to file tools/build/src/tools/clang-linux.jam.rej
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/fc/fc9f85fc030e233142908241af7a846e60630aa7388de9a5fafb1f3a26840854.tar.bz2
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/93/93f4aad8f88d1437e50d95a2d066390ef3753b99ef5de24f7a46bc083bd6df06
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/boost/python_jam-1_77.patch
==> Patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/boost/fujitsu_version_analysis.patch failed.
==> Error: ProcessError: Command exited with status 1:
'/usr/bin/patch' '-s' '-p' '1' '-i' '/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/boost/fujitsu_version_analysis.patch' '-d' '.'
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/openssh-8.7p1-uwgwne4attck5nvbso5cekek65d3jm6w
==> Installing openmpi-4.1.1-o6rg7po3nrfowtm34ntepgkxaxx4d2pd
==> No binary for openmpi-4.1.1-o6rg7po3nrfowtm34ntepgkxaxx4d2pd found: installing from source
==> Warning: Skipping build of gengeo-163-ut54lsiedylr2izrf354qy44rpcgij7l since boost-1.77.0-gvyu5cujfwazqsvt7u2y5sooput35q4o failed
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/e2/e24f7a778bd11a71ad0c14587a7f5b00e68a71aa5623e2157bafee3d44c07cda.tar.bz2
==> No patches needed for openmpi
==> openmpi: Executing phase: 'autoreconf'
==> openmpi: Executing phase: 'configure'
==> Error: ProcessError: Command exited with status 1:
'/home/rccs-sdt/a01008/spack-stage/spack-stage-openmpi-4.1.1-o6rg7po3nrfowtm34ntepgkxaxx4d2pd/spack-src/configure' '--prefix=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/openmpi-4.1.1-o6rg7po3nrfowtm34ntepgkxaxx4d2pd' '--enable-shared' '--disable-silent-rules' '--disable-builtin-atomics' '--enable-static' '--without-pmi' '--with-zlib=/usr' '--enable-mpi1-compatibility' '--without-hcoll' '--without-verbs' '--without-fca' '--without-psm' '--without-mxm' '--without-knem' '--without-psm2' '--without-cma' '--without-xpmem' '--without-ucx' '--without-ofi' '--without-loadleveler' '--without-sge' '--without-alps' '--without-slurm' '--without-tm' '--without-lsf' '--disable-memchecker' '--with-libevent=/usr' '--with-hwloc=/usr' '--disable-java' '--disable-mpi-java' '--without-cuda' '--enable-wrapper-rpath' '--disable-wrapper-runpath' '--disable-mpi-cxx' '--disable-cxx-exceptions' '--with-wrapper-ldflags=-Wl,-rpath,/opt/FJSVxtclanga/tcsds-1.2.34/clang-comp/lib64 -Wl,-rpath,/opt/FJSVxtclanga/tcsds-1.2.34/lib64'

1 error found in build log:
915 checking hwloc.h presence... no
916 checking for hwloc.h... no
917 checking hwloc.h usability... no
918 checking hwloc.h presence... no
919 checking for hwloc.h... no
920 configure: WARNING: external hwloc cannot be built
>> 921 configure: error: Cannot continue.

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-openmpi-4.1.1-o6rg7po3nrfowtm34ntepgkxaxx4d2pd/spack-build-out.txt

==> Error: gengeo-163-ut54lsiedylr2izrf354qy44rpcgij7l: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).


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