Failed Reason

Failed to install dependency package :
------------------------------------------------
848 ^
>> 849 ../jkweb/bPlusTree.h:102:45: error: unknown type name 'bits64'
850 void bptStringKeyAtPos(struct bptFile *bpt, bits64 itemPos, char *r
esult, int maxResultSize);
851 ^
>> 852 ../jkweb/bPlusTree.h:109:2: error: unknown type name 'bits64'
853 bits64 itemCount, /* Number of elements in array. */
854 ^
>> 855 ../jkweb/bPlusTree.h:110:2: error: unknown type name 'bits32'
856 bits32 blockSize, /* B+ tree block size - # of childr
en for each node. */
857 ^
>> 858 ../jkweb/bPlusTree.h:112:2: error: unknown type name 'bits32'
859 bits32 keySize, /* Size of
key */
860 ^
>> 861 ../jkweb/bPlusTree.h:114:2: error: unknown type name 'bits32'
862 bits32 valSize, /* Size of
value */
863 ^
>> 864 ../jkweb/bPlusTree.h:118:64: error: unknown type name 'bits64'
865 void bptFileBulkIndexToOpenFile(void *itemArray, int itemSize, bits
64 itemCount, bits32 blockSize,
866 ^
>> 867 ../jkweb/bPlusTree.h:118:82: error: unknown type name 'bits32'
868 void bptFileBulkIndexToOpenFile(void *itemArray, int itemSize, bits
64 itemCount, bits32 blockSize,
869
^
>> 870 ../jkweb/bPlusTree.h:119:50: error: unknown type name 'bits32'
871 void (*fetchKey)(const void *va, char *keyBuf), bits32 keyS
ize,
872 ^
>> 873 ../jkweb/bPlusTree.h:120:37: error: unknown type name 'bits32'
874 void* (*fetchVal)(const void *va), bits32 valSize, FILE *f)
;
875 ^
>> 876 ../jkweb/bPlusTree.h:120:53: error: unknown type name 'FILE'
877 void* (*fetchVal)(const void *va), bits32 valSize, FILE *f)
;
878 ^
879 fatal error: too many errors emitted, stopping now [-ferror-limit=]
880 20 errors generated.
881 make[2]: *** [Makefile:419: bbiAugment.o] Error 1
882 make[2]: *** Waiting for unfinished jobs....
883 In file included from fastq_stuff.c:5:
>> 884 ../beato/fastq_stuff.h:22:1: error: unknown type name 'boolean'
885 boolean read_fastq_auto(struct fastq_auto* fq, struct lineFile* lf,
boolean just_seq_qual);
886 ^
887 ../beato/fastq_stuff.h:22:55: warning: declaration of 'struct lineF
ile' will not be visible outside of this function [-Wvisibility]
888 boolean read_fastq_auto(struct fastq_auto* fq, struct lineFile* lf,
boolean just_seq_qual);
889 ^
>> 890 ../beato/fastq_stuff.h:22:69: error: unknown type name 'boolean'
891 boolean read_fastq_auto(struct fastq_auto* fq, struct lineFile* lf,
boolean just_seq_qual);
892
^
>> 893 ../beato/fastq_stuff.h:27:31: error: unknown type name 'FILE'
894 void fprint_fastq_auto_normal(FILE* f, struct fastq_auto fq, int wr
ap_len);
895 ^
896 In file included from favs.c:8:
897 In file included from ../beato/favs.h:5:
>> 898 ../jkweb/hash.h:62:5: error: unknown type name 'bits32'
899 bits32 hashVal;
900 ^
>> 901 ../jkweb/hash.h:68:5: error: unknown type name 'bits32'
902 bits32 mask; /* Mask hashCrc with this to get it to fit
table. */
903 ^
>> 904 ../jkweb/hash.h:74:5: error: unknown type name 'boolean'
905 boolean autoExpand; /* Automatically expand hash */
906 ^
>> 907 ../jkweb/hash.h:91:1: error: unknown type name 'bits32'
908 bits32 hashString(char *string);
909 ^
>> 910 ../jkweb/hash.h:94:1: error: unknown type name 'bits32'
911 bits32 hashCrc(char *string);
912 ^
>> 913 ../jkweb/hash.h:224:45: error: unknown type name 'boolean'
914 struct hash *newHashExt(int powerOfTwoSize, boolean useLocalMem);
915 ^
>> 916 ../jkweb/hash.h:258:53: error: unknown type name 'FILE'
917 void hashPrintStats(struct hash *hash, char *label, FILE *fh);
918 ^
>> 919 ../jkweb/hash.h:264:1: error: unknown type name 'boolean'
920 boolean hashMayRemove(struct hash *hash, char *name);
921 ^
922 In file included from metaBig.c:5:
>> 923 ../beato/bbiAugment.h:9:52: error: unknown type name 'bits32'
924 struct bbiFile* bbiFileOpenWithDir(char* fileName, bits32 sig, char
* typeName, char* udcDir);
925 ^
926 In file included from sax.c:5:
>> 927 ../beato/sax.h:6:50: error: unknown type name 'size_t'
928 char* sax_from_array_force_window(double* array, size_t length, siz
e_t alphabet_size, size_t window_size, double mean, double std);
929 ^
>> 930 ../beato/sax.h:6:65: error: unknown type name 'size_t'
931 char* sax_from_array_force_window(double* array, size_t length, siz
e_t alphabet_size, size_t window_size, double mean, double std);
932 ^
>> 933 ../beato/sax.h:6:87: error: unknown type name 'size_t'
934 char* sax_from_array_force_window(double* array, size_t length, siz
e_t alphabet_size, size_t window_size, double mean, double std);
935
^
>> 936 ../beato/sax.h:11:37: error: unknown type name 'size_t'
937 char* sax_from_array(double* array, size_t length, size_t alphabet_
size);
938 ^
>> 939 ../beato/sax.h:11:52: error: unknown type name 'size_t'
940 char* sax_from_array(double* array, size_t length, size_t alphabet_
size);
941 ^
942 In file included from stuff.c:5:
943 In file included from ../beato/stuff.h:5:
944 In file included from ../jkweb/basicBed.h:13:
945 In file included from ../jkweb/psl.h:13:
>> 946 ../jkweb/localmem.h:22:1: error: unknown type name 'size_t'
947 size_t lmAvailable(struct lm *lm);
948 ^
>> 949 ../jkweb/localmem.h:25:1: error: unknown type name 'size_t'
950 size_t lmSize(struct lm *lm);
951 ^
>> 952 ../jkweb/localmem.h:28:30: error: unknown type name 'size_t'
953 void *lmAlloc(struct lm *lm, size_t size);
954 ^
>> 955 ../jkweb/localmem.h:31:47: error: unknown type name 'size_t'
956 void *lmAllocMoreMem(struct lm *lm, void *pt, size_t oldSize, size_
t newSize);
957 ^
>> 958 ../jkweb/localmem.h:31:63: error: unknown type name 'size_t'
959 void *lmAllocMoreMem(struct lm *lm, void *pt, size_t oldSize, size_
t newSize);
960 ^
>> 961 ../jkweb/localmem.h:35:43: error: unknown type name 'size_t'
962 void *lmCloneMem(struct lm *lm, void *pt, size_t size);
963 ^
964 1 warning and 3 errors generated.
965 make[2]: *** [Makefile:419: fastq_stuff.o] Error 1
966 mv -f .deps/cluster.Tpo .deps/cluster.Po
967 8 errors generated.

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-libbeato-master-lhvoqdisqvxva3jrrttrexnmdgdzsouw/spack-build-out.txt