List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
Please contact us from email:

maker 3.01.03

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pip-21.1.2-lraxbrobmv3m3awsrfqfvxwklwpu52rf
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-mpi4py-3.1.2-z4eydgoy4ox7rqycg2zdlebpi5ghwtla
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-cppy-1.1.0-linzg2uz35ut7khvcm63bayt5nbqlr2e
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/meson-0.60.0-ndoo3khnwedtaakey3qtuh2r6fqq5v6k
==> Installing perl-dbd-pg-3.10.0-fnlzw42q42d56izfotebhvyeabwmh4et
==> No binary for perl-dbd-pg-3.10.0-fnlzw42q42d56izfotebhvyeabwmh4et found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/e1/e103268a63e2828e3d43659bdba5f743446cbbe047a766f843112eedae105f80.tar.gz
==> No patches needed for perl-dbd-pg
==> perl-dbd-pg: Executing phase: 'configure'
==> perl-dbd-pg: Executing phase: 'build'
==> perl-dbd-pg: Executing phase: 'install'
==> perl-dbd-pg: Successfully installed perl-dbd-pg-3.10.0-fnlzw42q42d56izfotebhvyeabwmh4et
Fetch: 0.90s. Build: 25.65s. Total: 26.55s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-dbd-pg-3.10.0-fnlzw42q42d56izfotebhvyeabwmh4et
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/expat-2.4.1-6d5wgt5slcremuk5p6srspiodqufzm3h
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pillow-8.0.0-inksfdgdd6trpv2cilc2spyeneedxzt7
==> Installing blast-plus-2.12.0-u4il6avl5eumo55ytbkpeml3taglsbiy
==> No binary for blast-plus-2.12.0-u4il6avl5eumo55ytbkpeml3taglsbiy found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/fd/fda3c9c9d488cad6c1880a98a236d842bcf3610e3e702af61f7a48cf0a714b88.tar.gz
==> No patches needed for blast-plus
==> blast-plus: Executing phase: 'autoreconf'
==> blast-plus: Executing phase: 'configure'
==> Error: ProcessError: Command exited with status 1:
'/vol0003/rccs-sdt/a01008/spack-stage/spack-stage-blast-plus-2.12.0-u4il6avl5eumo55ytbkpeml3taglsbiy/spack-src/c++/configure' '--prefix=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/blast-plus-2.12.0-u4il6avl5eumo55ytbkpeml3taglsbiy' '--with-bin-release' '--without-debug' '--with-mt' '--without-boost' '--with-dll' '--without-static' '--without-static-exe' '--with-jpeg=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libjpeg-turbo-2.1.0-uocr25meow4yzjybzchavleirgndwx4i' '--with-png=/usr' '--with-freetype=/usr' '--without-hdf5' '--with-z=/usr' '--with-bz2=/usr' '--with-lzo=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/lzo-2.10-ilmm6evbqallg652set6a5oa26hhxcqh' '--with-gnutls=/usr' '--with-openssl=/usr' '--with-pcre=/usr' '--with-python=/vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj' '--with-perl=/usr'

1 error found in build log:
56 checking whether /vol0003/rccs-sdt/a01008/spack-all-test/env-2022022
5/spack/lib/spack/env/fj/fcc has an option to discard unneeded shar
ed libraries... -Wl,--as-needed
57 checking whether /vol0003/rccs-sdt/a01008/spack-all-test/env-2022022
5/spack/lib/spack/env/fj/fcc has an option to link in whole static
archives... -Wl,--whole-archive
58 checking whether _LIBCPP_VERSION is declared... no
59 checking how to enable C++ '14 features in /vol0003/rccs-sdt/a01008/
spack-all-test/env-20220225/spack/lib/spack/env/fj/case-insensitive/
FCC ... -std=gnu++14
60 checking how to enable C '11 or at least '99 features in /vol0003/rc
cs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spack/env/fj/fcc
... -std=gnu11 -fgnu89-inline
61 checking for dpkg-architecture... no
>> 62 configure: error: Unable to find static libstdc++ requested by --wit
h-bin-release.

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-blast-plus-2.12.0-u4il6avl5eumo55ytbkpeml3taglsbiy/spack-build-out.txt

==> Installing perl-carp-clan-6.06-dp2so6r2pujek24tcw55h6xwnlzundky
==> No binary for perl-carp-clan-6.06-dp2so6r2pujek24tcw55h6xwnlzundky found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/ea/ea4ac8f611354756d43cb369880032901e9cc4cc7e0bebb7b647186dac00c9d4.tar.gz
==> No patches needed for perl-carp-clan
==> perl-carp-clan: Executing phase: 'configure'
==> perl-carp-clan: Executing phase: 'build'
==> perl-carp-clan: Executing phase: 'install'
==> perl-carp-clan: Successfully installed perl-carp-clan-6.06-dp2so6r2pujek24tcw55h6xwnlzundky
Fetch: 0.69s. Build: 4.62s. Total: 5.31s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-carp-clan-6.06-dp2so6r2pujek24tcw55h6xwnlzundky
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-module-build-tiny-0.039-wvxbrn25g33t4ndabqgerd524ljtan6q
==> Installing perl-pegex-0.64-xth2duljlla6dfpvck525vunwefn4azx
==> No binary for perl-pegex-0.64-xth2duljlla6dfpvck525vunwefn4azx found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/27/27e00264bdafb9c2109212b9654542032617fecf7b7814915d2bdac198f067cd.tar.gz
==> No patches needed for perl-pegex
==> perl-pegex: Executing phase: 'configure'
==> perl-pegex: Executing phase: 'build'
==> perl-pegex: Executing phase: 'install'
==> perl-pegex: Successfully installed perl-pegex-0.64-xth2duljlla6dfpvck525vunwefn4azx
Fetch: 0.89s. Build: 9.99s. Total: 10.87s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-pegex-0.64-xth2duljlla6dfpvck525vunwefn4azx
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-test-differences-0.64-avzqgq4jk5qb4bidnldktojm3fkhflim
==> Installing perl-cgi-4.53-dbwdkn3hviwb3442kyijs5cjk6jzdqg2
==> No binary for perl-cgi-4.53-dbwdkn3hviwb3442kyijs5cjk6jzdqg2 found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/c6/c67e732f3c96bcb505405fd944f131fe5c57b46e5d02885c00714c452bf14e60.tar.gz
==> No patches needed for perl-cgi
==> perl-cgi: Executing phase: 'configure'
==> perl-cgi: Executing phase: 'build'
==> perl-cgi: Executing phase: 'install'
==> perl-cgi: Successfully installed perl-cgi-4.53-dbwdkn3hviwb3442kyijs5cjk6jzdqg2
Fetch: 0.87s. Build: 7.39s. Total: 8.26s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-cgi-4.53-dbwdkn3hviwb3442kyijs5cjk6jzdqg2
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-http-message-6.13-a6edzjbvchxd4nueh4scbt7d5wrff7j2
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-net-http-6.17-n4fq4f4lymer5zfv4dmn3ynj7jeya3ic
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-www-robotrules-6.02-64uu4wfzrl2mb4wnx262do2pxdznqex2
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-alien-libxml2-0.10_01-l4acqbuz5cekfp7kh7ip55kd6ch5cwc6
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-packaging-21.0-s6cid7alqa7tw3xxefl7ekdcot2fjcgn
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-cycler-0.10.0-iyssuq4lbtydqiwmax5gft7kl54vbthx
==> Installing py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh
==> No binary for py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/63/63571bb7897a584ca3249c86dd01c10bcb5fe4296e3568b2e9c1a55356b6410e.zip
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/py-numpy/check_executables.patch
==> py-numpy: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 1:
'/vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj/bin/python3.9' '-s' 'setup.py' '--no-user-cfg' 'build'
See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh/spack-build-out.txt

[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-tomli-1.2.1-qxysj56clo6kspouoq4msjtem3n3lijr
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-kiwisolver-1.3.2-ewoonffipal5ap3mcwl4lzxgajk66pvy
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/glib-2.70.0-rwhiqulrjvqznxg7eacgg4yob6viseed
==> Installing perl-bit-vector-7.4-ok3oqfd7ueoussvtocw7xw6ptohiw3zj
==> No binary for perl-bit-vector-7.4-ok3oqfd7ueoussvtocw7xw6ptohiw3zj found: installing from source
==> Warning: Skipping build of py-h5py-3.4.0-pi4lkdtk5ilcmye3gxu6g5kyzm3qqs6s since py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh failed
==> Warning: Skipping build of py-matplotlib-3.4.3-5e2genfoboyc3seq62qdeapry6wbkksr since py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh failed
==> Warning: Skipping build of bcftools-1.12-uw6ozt5oqlop3oovmrukn6tlqunaf7vg since py-matplotlib-3.4.3-5e2genfoboyc3seq62qdeapry6wbkksr failed
==> Fetching https://mirror.spack.io/_source-cache/archive/3c/3c6daa671fecfbc35f92a9385b563d65f50dfc6bdc8b4805f9ef46c0d035a926.tar.gz
==> No patches needed for perl-bit-vector
==> perl-bit-vector: Executing phase: 'configure'
==> perl-bit-vector: Executing phase: 'build'
==> perl-bit-vector: Executing phase: 'install'
==> perl-bit-vector: Successfully installed perl-bit-vector-7.4-ok3oqfd7ueoussvtocw7xw6ptohiw3zj
Fetch: 0.78s. Build: 17.04s. Total: 17.81s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-bit-vector-7.4-ok3oqfd7ueoussvtocw7xw6ptohiw3zj
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-readonly-2.05-dhsdicwiqhvuigrmqkdymqjxnbioelzp
==> Installing perl-inline-c-0.78-qno5q7s6wclichzl2saduu3zhnim5qfr
==> No binary for perl-inline-c-0.78-qno5q7s6wclichzl2saduu3zhnim5qfr found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/9a/9a7804d85c01a386073d2176582b0262b6374c5c0341049da3ef84c6f53efbc7.tar.gz
==> No patches needed for perl-inline-c
==> perl-inline-c: Executing phase: 'configure'
==> perl-inline-c: Executing phase: 'build'
==> perl-inline-c: Executing phase: 'install'
==> perl-inline-c: Successfully installed perl-inline-c-0.78-qno5q7s6wclichzl2saduu3zhnim5qfr
Fetch: 1.54s. Build: 34.43s. Total: 35.97s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-inline-c-0.78-qno5q7s6wclichzl2saduu3zhnim5qfr
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-test-most-0.35-hxca3znmwkklp33jgnci4si6gtcz6xn7
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-http-daemon-6.01-qmz4jtoxtnuzkyhsptfdqkvpfmpwhklp
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-http-negotiate-6.01-ru6shlzxe2ujxhgxpsoo3pgfsfy2pnlx
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-http-cookies-6.04-tfjryzzhufxclge62vd3qnzqdfxcvxmd
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-xml-libxml-2.0201-r2ts5w5t2dyulzdv23crc2gfc5yvh3vo
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-setuptools-scm-6.3.2-eobdhwxld3ay3ywvassepocvioqlmoyt
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/exonerate-2.4.0-7bxe3crmycocuiozdb44ck3i2xodbesx
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-ipc-run-20180523.0-pgdfkr54vtvepcf3h5nqk6qzik7we7aj
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-libwww-perl-6.33-lofdgezogjxbbh35l3nlw4b7cs6vn336
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-python-dateutil-2.8.2-47xpbgpsge4zr2jarbvsyc5uofvh3srv
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-xml-parser-2.44-umtrn7hq7zrrc2ooghomgix2kb6fbk32
==> Installing interproscan-4.8-p2d3w2cvvdnmzbo2cku2vhhwwekxudis
==> No binary for interproscan-4.8-p2d3w2cvvdnmzbo2cku2vhhwwekxudis found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/f1/f1cb0ae1218eb05ed59ad7f94883f474eb9a6185a56ad3a93a364acb73506a3f.tar.gz
==> Fetching https://mirror.spack.io/_source-cache/archive/55/551610a4682b112522f3ded5268f76ba9a47399a72e726fafb17cc938a50e7ee.tar.gz
==> Moving resource stage
source : /home/rccs-sdt/a01008/spack-stage/resource-binaries-p2d3w2cvvdnmzbo2cku2vhhwwekxudis/spack-src/
destination : /home/rccs-sdt/a01008/spack-stage/spack-stage-interproscan-4.8-p2d3w2cvvdnmzbo2cku2vhhwwekxudis/spack-src/iprscan
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/interproscan/non-interactive.patch
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/interproscan/ps_scan.patch
==> interproscan: Executing phase: 'install'
==> interproscan: Successfully installed interproscan-4.8-p2d3w2cvvdnmzbo2cku2vhhwwekxudis
Fetch: 3.96s. Build: 1m 39.55s. Total: 1m 43.50s.
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/interproscan-4.8-p2d3w2cvvdnmzbo2cku2vhhwwekxudis
==> Error: maker-3.01.03-o5paqw7gawbojamldx6kgxcjnf2acgfz: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-xml-dom-1.46-4uhgoavaeewlvgiiqdwcbcnolgxuyoqd
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-xml-twig-3.52-d3k652vvrziceq2bk326apbx3kn4vgve
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/perl-xml-dom-xpath-0.14-caijnqkwwheogkae5cwq55ejbl7a27zg


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