List of Open Source Software which can be built on Fugaku

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 Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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modeltest-ng 0.1.7

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
0225/spack/lib/spack/env/fj/fcc -I/home/rccs-sdt/a01008/spack-stag
e/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/s
pack-src/libs/pll-modules/libs/libpll/src -DPTHREADS -pthread -Wall
-Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -O3 -fPIC -MD -MT libs/p
ll-modules/src/util/CMakeFiles/pllmodutil_obj.dir/models_mult.c.o -
MF CMakeFiles/pllmodutil_obj.dir/models_mult.c.o.d -o CMakeFiles/pl
lmodutil_obj.dir/models_mult.c.o -c /home/rccs-sdt/a01008/spack-sta
ge/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/
spack-src/libs/pll-modules/src/util/models_mult.c
245 [ 32%] Building C object libs/pll-modules/src/tree/CMakeFiles/pllmo
dtree_obj.dir/pll_tree.c.o
246 cd /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-modeltest-ng-0.
1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack-build-o5ytyry/libs/pll-m
odules/src/tree && /vol0003/rccs-sdt/a01008/spack-all-test/env-2022
0225/spack/lib/spack/env/fj/fcc -I/home/rccs-sdt/a01008/spack-stag
e/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/s
pack-src/libs/pll-modules/libs/libpll/src -I/home/rccs-sdt/a01008/s
pack-stage/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxd
hvtaw5r/spack-src/libs/pll-modules/src/tree -DPTHREADS -pthread -Wa
ll -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -O3 -fPIC -MD -MT libs
/pll-modules/src/tree/CMakeFiles/pllmodtree_obj.dir/pll_tree.c.o -M
F CMakeFiles/pllmodtree_obj.dir/pll_tree.c.o.d -o CMakeFiles/pllmod
tree_obj.dir/pll_tree.c.o -c /home/rccs-sdt/a01008/spack-stage/spac
k-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack-s
rc/libs/pll-modules/src/tree/pll_tree.c
247 [ 32%] Building C object libs/pll-modules/src/tree/CMakeFiles/pllmo
dtree_obj.dir/rtree_operations.c.o

...

254 [ 35%] Building C object libs/pll-modules/src/tree/CMakeFiles/pllmo
dtree_obj.dir/utree_distances.c.o
255 cd /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-modeltest-ng-0.
1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack-build-o5ytyry/libs/pll-m
odules/src/tree && /vol0003/rccs-sdt/a01008/spack-all-test/env-2022
0225/spack/lib/spack/env/fj/fcc -I/home/rccs-sdt/a01008/spack-stag
e/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/s
pack-src/libs/pll-modules/libs/libpll/src -I/home/rccs-sdt/a01008/s
pack-stage/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxd
hvtaw5r/spack-src/libs/pll-modules/src/tree -DPTHREADS -pthread -Wa
ll -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -O3 -fPIC -MD -MT libs
/pll-modules/src/tree/CMakeFiles/pllmodtree_obj.dir/utree_distances
.c.o -MF CMakeFiles/pllmodtree_obj.dir/utree_distances.c.o.d -o CMa
keFiles/pllmodtree_obj.dir/utree_distances.c.o -c /home/rccs-sdt/a0
1008/spack-stage/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg
6giuxdhvtaw5r/spack-src/libs/pll-modules/src/tree/utree_distances.c
256 [ 35%] Built target pllmodalgorithm_obj
257 [ 36%] Building C object libs/pll-modules/src/tree/CMakeFiles/pllmo
dtree_obj.dir/tbe_functions.c.o
258 cd /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-modeltest-ng-0.
1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack-build-o5ytyry/libs/pll-m
odules/src/tree && /vol0003/rccs-sdt/a01008/spack-all-test/env-2022
0225/spack/lib/spack/env/fj/fcc -I/home/rccs-sdt/a01008/spack-stag
e/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/s
pack-src/libs/pll-modules/libs/libpll/src -I/home/rccs-sdt/a01008/s
pack-stage/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxd
hvtaw5r/spack-src/libs/pll-modules/src/tree -DPTHREADS -pthread -Wa
ll -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -O3 -fPIC -MD -MT libs
/pll-modules/src/tree/CMakeFiles/pllmodtree_obj.dir/tbe_functions.c
.o -MF CMakeFiles/pllmodtree_obj.dir/tbe_functions.c.o.d -o CMakeFi
les/pllmodtree_obj.dir/tbe_functions.c.o -c /home/rccs-sdt/a01008/s
pack-stage/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxd
hvtaw5r/spack-src/libs/pll-modules/src/tree/tbe_functions.c
259 In file included from /home/rccs-sdt/a01008/spack-stage/spack-stage
-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack-src/libs
/pll-modules/libs/libpll/src/parse_utree.y:22:
>> 260 /home/rccs-sdt/a01008/spack-stage/spack-stage-modeltest-ng-0.1.7-o5
ytyrysblgh44mr3wg6giuxdhvtaw5r/spack-src/libs/pll-modules/libs/libp
ll/src/pll.h:50:10: fatal error: 'x86intrin.h' file not found
261 #include <x86intrin.h>
262 ^~~~~~~~~~~~~
263 [ 37%] Building C object libs/pll-modules/src/tree/CMakeFiles/pllmo
dtree_obj.dir/utree_operations.c.o
264 cd /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-modeltest-ng-0.
1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack-build-o5ytyry/libs/pll-m
odules/src/tree && /vol0003/rccs-sdt/a01008/spack-all-test/env-2022
0225/spack/lib/spack/env/fj/fcc -I/home/rccs-sdt/a01008/spack-stag
e/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/s
pack-src/libs/pll-modules/libs/libpll/src -I/home/rccs-sdt/a01008/s
pack-stage/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxd
hvtaw5r/spack-src/libs/pll-modules/src/tree -DPTHREADS -pthread -Wa
ll -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -O3 -fPIC -MD -MT libs
/pll-modules/src/tree/CMakeFiles/pllmodtree_obj.dir/utree_operation
s.c.o -MF CMakeFiles/pllmodtree_obj.dir/utree_operations.c.o.d -o C
MakeFiles/pllmodtree_obj.dir/utree_operations.c.o -c /home/rccs-sdt
/a01008/spack-stage/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr
3wg6giuxdhvtaw5r/spack-src/libs/pll-modules/src/tree/utree_operatio
ns.c
265 [ 38%] Building C object libs/pll-modules/src/tree/CMakeFiles/pllmo
dtree_obj.dir/split_utree.c.o
266 cd /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-modeltest-ng-0.
1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack-build-o5ytyry/libs/pll-m
odules/src/tree && /vol0003/rccs-sdt/a01008/spack-all-test/env-2022
0225/spack/lib/spack/env/fj/fcc -I/home/rccs-sdt/a01008/spack-stag
e/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/s
pack-src/libs/pll-modules/libs/libpll/src -I/home/rccs-sdt/a01008/s
pack-stage/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxd
hvtaw5r/spack-src/libs/pll-modules/src/tree -DPTHREADS -pthread -Wa
ll -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -O3 -fPIC -MD -MT libs
/pll-modules/src/tree/CMakeFiles/pllmodtree_obj.dir/split_utree.c.o
-MF CMakeFiles/pllmodtree_obj.dir/split_utree.c.o.d -o CMakeFiles/
pllmodtree_obj.dir/split_utree.c.o -c /vol0003/rccs-sdt/a01008/spac
k-stage/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvt
aw5r/spack-build-o5ytyry/libs/pll-modules/src/tree/split_utree.c
267 1 error generated.
268 /home/rccs-sdt/a01008/spack-stage/spack-stage-modeltest-ng-0.1.7-o5
ytyrysblgh44mr3wg6giuxdhvtaw5r/spack-src/libs/pll-modules/src/msa/p
ll_msa.c:753:25: warning: result of comparison of constant -1 with
expression of type 'const char' is always false [-Wtautological-con
stant-out-of-range-compare]
269 if (seqchars[j] == -1)
270 ~~~~~~~~~~~ ^ ~~
>> 271 make[2]: *** [libs/pll-modules/libs/libpll/src/CMakeFiles/pll_obj.d
ir/build.make:115: libs/pll-modules/libs/libpll/src/CMakeFiles/pll_
obj.dir/parse_utree.c.o] Error 1
272 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack
-build-o5ytyry'
>> 273 make[1]: *** [CMakeFiles/Makefile2:312: libs/pll-modules/libs/libpl
l/src/CMakeFiles/pll_obj.dir/all] Error 2
274 make[1]: *** Waiting for unfinished jobs....
275 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack
-build-o5ytyry'
276 [ 39%] Building C object libs/pll-modules/src/tree/CMakeFiles/pllmo
dtree_obj.dir/lex_split.c.o
277 cd /vol0003/rccs-sdt/a01008/spack-stage/spack-stage-modeltest-ng-0.
1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack-build-o5ytyry/libs/pll-m
odules/src/tree && /vol0003/rccs-sdt/a01008/spack-all-test/env-2022
0225/spack/lib/spack/env/fj/fcc -I/home/rccs-sdt/a01008/spack-stag
e/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/s
pack-src/libs/pll-modules/libs/libpll/src -I/home/rccs-sdt/a01008/s
pack-stage/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxd
hvtaw5r/spack-src/libs/pll-modules/src/tree -DPTHREADS -pthread -Wa
ll -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -O3 -fPIC -MD -MT libs
/pll-modules/src/tree/CMakeFiles/pllmodtree_obj.dir/lex_split.c.o -
MF CMakeFiles/pllmodtree_obj.dir/lex_split.c.o.d -o CMakeFiles/pllm
odtree_obj.dir/lex_split.c.o -c /vol0003/rccs-sdt/a01008/spack-stag
e/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/s
pack-build-o5ytyry/libs/pll-modules/src/tree/lex_split.c
278 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack
-build-o5ytyry'
279 make[2]: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/sp
ack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack
-build-o5ytyry'

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-modeltest-ng-0.1.7-o5ytyrysblgh44mr3wg6giuxdhvtaw5r/spack-build-out.txt

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