List of Open Source Software which can be built on Fugaku

Spack logo
Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
Please contact us from email:

pathfinder 1.0.0

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Installing pathfinder-1.0.0-hov66jssy75i2t74c2a6enyfubbszlrc
==> No binary for pathfinder-1.0.0-hov66jssy75i2t74c2a6enyfubbszlrc found: installing from source
==> Fetching https://mirror.spack.io/_source-cache/archive/e0/e002ff7df1ee9a6ee8a892fc208e047e2daf4215ff0d77e7ddc6b09d0506be16.tgz
==> No patches needed for pathfinder
==> pathfinder: Executing phase: 'edit'
==> pathfinder: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' '--directory=PathFinder_ref' 'CC=cc'

3 errors found in build log:
41 doMultiSearches(config);
42 ^
43 main.c:301:13: warning: implicit declaration of function 'gets' is i
nvalid in C99 [-Wimplicit-function-declaration]
44 gets(stringBuffer);
45 ^
46 7 warnings generated.
>> 47 searchAlgorithms.c:456:21: error: expected an OpenMP directive
48 #pragma omp collapse(2)
49 ^
50 searchAlgorithms.c:508:5: warning: implicit declaration of function
'YAMLWriteInt' is invalid in C99 [-Wimplicit-function-declaration]
51 YAMLWriteInt("Signatures Found", found);
52 ^
53 searchAlgorithms.c:509:5: warning: implicit declaration of function
'YAMLWriteString' is invalid in C99 [-Wimplicit-function-declaration
]
54 YAMLWriteString("Search Time", timeStr);
55 ^
56 searchAlgorithms.c:551:95: warning: '/*' within block comment [-Wcom
ment]
57 /* debug * /printf( "%d total threads, this one is %d\n"
, maxThreads, myThread ); /* debug */
58
^
>> 59 searchAlgorithms.c:568:21: error: expected an OpenMP directive
60 #pragma omp collapse(2)
61 ^
62 searchAlgorithms.c:588:21: warning: '/*' within block comment [-Wcom
ment]
63 /* <-- debug */
64 ^
65 searchAlgorithms.c:611:5: warning: implicit declaration of function
'YAMLWriteInt' is invalid in C99 [-Wimplicit-function-declaration]

...

69 YAMLWriteString("Search Time", timeStr);
70 ^
71 searchAlgorithms.c:626:5: warning: '/*' within block comment [-Wcomm
ent]
72 /* <-- debug */
73 ^
74 7 warnings and 2 errors generated.
>> 75 make: *** [make_targets:70: searchAlgorithms.o] Error 1
76 make: *** Waiting for unfinished jobs....
77 make: Leaving directory '/vol0003/rccs-sdt/a01008/spack-stage/spack-
stage-pathfinder-1.0.0-hov66jssy75i2t74c2a6enyfubbszlrc/spack-src/Pa
thFinder_ref'

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-pathfinder-1.0.0-hov66jssy75i2t74c2a6enyfubbszlrc/spack-build-out.txt


<= Back to list