List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-chemometrics 1.4.2

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /usr (external bzip2-1.0.6-pkyqs6czmr636ktska3fpjek77reodry)
[+] /usr (external curl-7.61.1-s5ho6wv4jx7d2f2vj27fvdaok5ajslfc)
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/gnuconfig-2021-08-14-ezyvb3gy7i726n45kwb44a4vxle3if3i
[+] /vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj (external python-3.9.9-3wcip6atrybofsb566d7pjqwhl76u4dp)
[+] /usr (external ncurses-6.1-qbvus6vwvtyxe33hxq4hbpazkrpy6ctb)
==> Installing openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o
==> No binary for openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/10/105bdc12fcd54c551e8e8ac96bc82412467244c32063689c41cee29ceb7452a2.tar.gz
==> No patches needed for openjdk
==> openjdk: Executing phase: 'install'
==> Error: PermissionError: [Errno 13] Permission denied: '/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o/legal/jdk.crypto.ec/ecc.md'

/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/openjdk/package.py:144, in install:
142 def install(self, spec, prefix):
143 top_dir = 'Contents/Home/' if platform.system() == "Darwin" else '.'
>> 144 install_tree(top_dir, prefix)

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o/spack-build-out.txt

==> Warning: Skipping build of r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd since openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o failed
==> Warning: Skipping build of r-som-0.3-5.1-q6sgtpra4jppfcmoehztnqt4vlw56iol since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-chemometrics-1.4.2-26hxrrp4jxp3tywjrlaztvrgwj35stem since r-som-0.3-5.1-q6sgtpra4jppfcmoehztnqt4vlw56iol failed
==> Warning: Skipping build of r-deoptimr-1.0-8-7nyejneps5wl6cymbnagtws64fkrvzds since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-robustbase-0.93-7-cj65maif3dgh3rdejvse6gq3yqvmhzno since r-deoptimr-1.0-8-7nyejneps5wl6cymbnagtws64fkrvzds failed
==> Warning: Skipping build of r-mclust-5.4.7-y6zptucbywibldayflrox2qorekcq5rp since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-mass-7.3-54-pmmwdmrvnwkbclok2ecllp5p7vtntbiu since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-class-7.3-17-453zliat2wueashoq3a7263ba4s66ajh since r-mass-7.3-54-pmmwdmrvnwkbclok2ecllp5p7vtntbiu failed
==> Warning: Skipping build of r-e1071-1.7-4-j7bplfi2wrtuy5uizz3kz26d4acbk25o since r-class-7.3-17-453zliat2wueashoq3a7263ba4s66ajh failed
==> Warning: Skipping build of r-nnet-7.3-14-um5s542yu5vlazxhgiebuxsv2of3sasm since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-pls-2.7-3-4fm5y2djc25ptmtvjmf4tcqrhzurutjn since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-mvtnorm-1.1-3-mwvd2qhbwzi6pc7xu4oa7c7ek2ciutgo since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-pcapp-1.9-73-gku4jrhksl56ulzyo2zqmiiydnznm333 since r-mvtnorm-1.1-3-mwvd2qhbwzi6pc7xu4oa7c7ek2ciutgo failed
==> Warning: Skipping build of r-rpart-4.1-15-3uupylnwwu4ptrzswssmawgup4kldf4e since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-lars-1.2-extpemkz5sy2bwcq4lfqk5a5jcs7zowf since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Error: r-chemometrics-1.4.2-26hxrrp4jxp3tywjrlaztvrgwj35stem: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).
[+] /usr (external pcre2-10.32-2v5oqubg7f5kjsxdijjldrqpmdiocf76)
[+] /usr (external readline-7.0-776innbqk3ca64hss3u4zvuh46f5xe4y)
[+] /usr (external xz-5.2.4-ur7otl6tq7yv3vijsn6wu2nnvot443ku)
[+] /usr (external zlib-1.2.11-o3hvygtdcp6vg3bpvsrurq4hgklwtype)
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/icu4c-67.1-hmdff6tgajfx4xdxnlafitauesya5c64


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