List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-metap 1.4

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /usr (external bzip2-1.0.6-pkyqs6czmr636ktska3fpjek77reodry)
[+] /usr (external curl-7.61.1-s5ho6wv4jx7d2f2vj27fvdaok5ajslfc)
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/gnuconfig-2021-08-14-ezyvb3gy7i726n45kwb44a4vxle3if3i
[+] /vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj (external python-3.9.9-3wcip6atrybofsb566d7pjqwhl76u4dp)
[+] /usr (external ncurses-6.1-qbvus6vwvtyxe33hxq4hbpazkrpy6ctb)
==> Installing openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o
==> No binary for openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/10/105bdc12fcd54c551e8e8ac96bc82412467244c32063689c41cee29ceb7452a2.tar.gz
==> No patches needed for openjdk
==> openjdk: Executing phase: 'install'
==> Error: PermissionError: [Errno 13] Permission denied: '/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o/legal/jdk.crypto.ec/ecc.md'

/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/openjdk/package.py:144, in install:
142 def install(self, spec, prefix):
143 top_dir = 'Contents/Home/' if platform.system() == "Darwin" else '.'
>> 144 install_tree(top_dir, prefix)

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o/spack-build-out.txt

==> Warning: Skipping build of r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd since openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o failed
==> Warning: Skipping build of r-biobase-2.50.0-k22ss54hmg34ngzo5t4swdk6fopzreis since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-multtest-2.46.0-7o3lbzfjfq7kkmp2njxvgiwp75l64y6u since r-biobase-2.50.0-k22ss54hmg34ngzo5t4swdk6fopzreis failed
==> Warning: Skipping build of r-mutoss-0.1-12-r6gf7v5wmgpu4cagvypvbe4xdiesg3fg since r-multtest-2.46.0-7o3lbzfjfq7kkmp2njxvgiwp75l64y6u failed
==> Warning: Skipping build of r-metap-1.4-6erizlpc2hvebrelvcbxmmxxbedxacp2 since r-mutoss-0.1-12-r6gf7v5wmgpu4cagvypvbe4xdiesg3fg failed
==> Warning: Skipping build of r-tmvnsim-1.0-2-asffc6x5geu33ngzppfhoxisc2stxphr since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-mnormt-2.0.2-dnadbltp4laewp6c7xwld3hrqfpx2wwo since r-tmvnsim-1.0-2-asffc6x5geu33ngzppfhoxisc2stxphr failed
==> Warning: Skipping build of r-sn-1.6-2-ur5nkrmoitax4dqut6czvm67yn5b3hc5 since r-mnormt-2.0.2-dnadbltp4laewp6c7xwld3hrqfpx2wwo failed
==> Warning: Skipping build of r-tfisher-0.2.0-6onehdbtjm3bcsjybltcz4u5jxcvogzm since r-sn-1.6-2-ur5nkrmoitax4dqut6czvm67yn5b3hc5 failed
==> Warning: Skipping build of r-matrixstats-0.61.0-hejlwgzjrzlugmbbuv3vtc5bdb3kix7z since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-conquer-1.0.2-iahysbf5pohag2pxhgmuafp4jbqwthqa since r-matrixstats-0.61.0-hejlwgzjrzlugmbbuv3vtc5bdb3kix7z failed
==> Warning: Skipping build of r-quantreg-5.82-p3cslbfwz4q4upx7xp5zvuuqfpms7oau since r-conquer-1.0.2-iahysbf5pohag2pxhgmuafp4jbqwthqa failed
==> Warning: Skipping build of r-biocgenerics-0.36.0-t7umcmsxli26dcatnfajusvw2iq7iwxn since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-zoo-1.8-8-pkbdhqwblttbkeh5dh2uwzkmds55cxnz since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-sandwich-3.0-0-xfmbcr52lk54aw5l4jv5cf6jf7xfgpsh since r-zoo-1.8-8-pkbdhqwblttbkeh5dh2uwzkmds55cxnz failed
==> Warning: Skipping build of r-multcomp-1.4-15-qvsdjf5f2yarn4y7tsnui5bvdip37sa6 since r-sandwich-3.0-0-xfmbcr52lk54aw5l4jv5cf6jf7xfgpsh failed
==> Warning: Skipping build of r-matrix-1.3-4-r3cv3g7e4rbjpu54oxtn36fqkknlp7bj since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-survival-3.2-7-wvcxfwxxuaw2ijylprxpyixnjjzv554q since r-matrix-1.3-4-r3cv3g7e4rbjpu54oxtn36fqkknlp7bj failed
==> Warning: Skipping build of r-th-data-1.0-10-jf2hkx7om356rkr7gju27nuditgx3goe since r-survival-3.2-7-wvcxfwxxuaw2ijylprxpyixnjjzv554q failed
==> Warning: Skipping build of r-matrixmodels-0.4-1-erdmd7cagtchi2cdxuprhy37ukvzgvl2 since r-matrix-1.3-4-r3cv3g7e4rbjpu54oxtn36fqkknlp7bj failed
==> Warning: Skipping build of r-mathjaxr-1.0-1-nsckx3i2debtqs7ligounfkzorntvcwz since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-numderiv-2016.8-1.1-57wue3jiunkou7ngj4q5e4p5kdycobvd since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-mvtnorm-1.1-3-mwvd2qhbwzi6pc7xu4oa7c7ek2ciutgo since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-rcpp-1.0.7-n2ruao7tr3cg6mabmekhqzwq6doyosx7 since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-rcpparmadillo-0.10.1.2.2-ck5lqauxiq3uhjv2jbtm4idk364y2kmu since r-rcpp-1.0.7-n2ruao7tr3cg6mabmekhqzwq6doyosx7 failed
==> Warning: Skipping build of r-lattice-0.20-44-zhivmcbxm5rdy4fhq5xebw2ddplo4vo5 since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-plotrix-3.7-8-lyhjphshbn2kq3pwi3wqyaytiejpbeti since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-gbrd-0.4-11-6gy4blyjjtx5tvrzzjouou5hphbw2gzt since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-rdpack-2.1-ja4perolsiy2echjzjpxuki4usovegfr since r-gbrd-0.4-11-6gy4blyjjtx5tvrzzjouou5hphbw2gzt failed
==> Warning: Skipping build of r-rbibutils-2.0-vrxitge465h2j2apr665dkipnpeehnce since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-codetools-0.2-18-2ofjyjdurwih4k3frtj6gbharxh56uit since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-mass-7.3-54-pmmwdmrvnwkbclok2ecllp5p7vtntbiu since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-sparsem-1.78-np367ovcl2ih37dvggrmhihhh5ylllfg since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Error: r-metap-1.4-6erizlpc2hvebrelvcbxmmxxbedxacp2: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).
[+] /usr (external pcre2-10.32-2v5oqubg7f5kjsxdijjldrqpmdiocf76)
[+] /usr (external readline-7.0-776innbqk3ca64hss3u4zvuh46f5xe4y)
[+] /usr (external xz-5.2.4-ur7otl6tq7yv3vijsn6wu2nnvot443ku)
[+] /usr (external zlib-1.2.11-o3hvygtdcp6vg3bpvsrurq4hgklwtype)
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/icu4c-67.1-hmdff6tgajfx4xdxnlafitauesya5c64


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