List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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r-wgcna 1.69

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
==> Warning: openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o failed to install
==> Warning: Skipping build of r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd since openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o failed
==> Warning: Skipping build of r-impute-1.64.0-mfltjqh5dh3biejqqvejxtn3e5fuy7ke since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-wgcna-1.69-eqmab5gzi57ufuvgthwbh3sprkzxdkwy since r-impute-1.64.0-mfltjqh5dh3biejqqvejxtn3e5fuy7ke failed
==> Warning: Skipping build of r-foreign-0.8-81-qzrludbvxkiptvfoeezbws7squqjxcem since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-hmisc-4.4-2-u35rclf6p6onsz6pizziphnwfoknkbet since r-foreign-0.8-81-qzrludbvxkiptvfoeezbws7squqjxcem failed
==> Warning: Skipping build of r-biobase-2.50.0-k22ss54hmg34ngzo5t4swdk6fopzreis since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-annotationdbi-1.52.0-4avxuhzftme4hzw7qqa5z3olfe4yzigo since r-biobase-2.50.0-k22ss54hmg34ngzo5t4swdk6fopzreis failed
==> Warning: Skipping build of r-go-db-3.12.1-wwrrs26cb5uhnbhehw5xidtug4nblkqo since r-annotationdbi-1.52.0-4avxuhzftme4hzw7qqa5z3olfe4yzigo failed
==> Warning: Skipping build of r-bit-4.0.4-zkwzjlyap5kmgvoogf6zkoavtfxforlm since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-bit64-4.0.5-qdummkzvwml4u4gffwfl2kqjlu55gh6g since r-bit-4.0.4-zkwzjlyap5kmgvoogf6zkoavtfxforlm failed
==> Warning: Skipping build of r-rsqlite-2.2.2-3cd4kmq6xzlyhcb4b3ugib2arse26ccl since r-bit64-4.0.5-qdummkzvwml4u4gffwfl2kqjlu55gh6g failed
==> Warning: Skipping build of r-rcolorbrewer-1.1-2-dqk4xodtaoii4g67royddbtzkz7ksqr4 since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-scales-1.1.1-p7fehdy6ehoaqqiivq5g3g5jjrrawgmy since r-rcolorbrewer-1.1-2-dqk4xodtaoii4g67royddbtzkz7ksqr4 failed
==> Warning: Skipping build of r-ggplot2-3.3.5-56eivbcpt7q5eqey5fjagmohreh26i3f since r-scales-1.1.1-p7fehdy6ehoaqqiivq5g3g5jjrrawgmy failed
==> Warning: Skipping build of r-viridis-0.5.1-otpwya5ngsbok2kdwqplyeji5bsz4535 since r-ggplot2-3.3.5-56eivbcpt7q5eqey5fjagmohreh26i3f failed
==> Warning: Skipping build of r-latticeextra-0.6-28-6l5w5iqzlutzn3zppjzqw2ub3i5pdw27 since r-rcolorbrewer-1.1-2-dqk4xodtaoii4g67royddbtzkz7ksqr4 failed
==> Warning: Skipping build of r-stringr-1.4.0-4no6s6xonrl4lmljs2wyra6qdrbz4opa since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-htmltable-2.1.0-f7f3bg33m3lilz3rl257xqzqix7bespr since r-stringr-1.4.0-4no6s6xonrl4lmljs2wyra6qdrbz4opa failed
==> Warning: Skipping build of r-knitr-1.33-zqiunnirktrbfv4qht44vym6rk26gwua since r-stringr-1.4.0-4no6s6xonrl4lmljs2wyra6qdrbz4opa failed
==> Warning: Skipping build of r-pkgconfig-2.0.3-ymkoj7ujg2v6ht35utom4533y2ldrr3g since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-tibble-3.1.5-ejh4hbsgen5fox5ikhnyb526x2bstx6d since r-pkgconfig-2.0.3-ymkoj7ujg2v6ht35utom4533y2ldrr3g failed
==> Warning: Skipping build of r-waldo-0.2.3-nvzu6j5sl4xu66ly44kfn2eyequp2b55 since r-tibble-3.1.5-ejh4hbsgen5fox5ikhnyb526x2bstx6d failed
==> Warning: Skipping build of r-testthat-3.0.1-ftdupxt5ovnv3ayczdhzley7rlgqrh6q since r-waldo-0.2.3-nvzu6j5sl4xu66ly44kfn2eyequp2b55 failed
==> Warning: Skipping build of r-isoband-0.2.3-mxrfprlpjsw7plwqrrkpxlypfeismhme since r-testthat-3.0.1-ftdupxt5ovnv3ayczdhzley7rlgqrh6q failed
==> Warning: Skipping build of r-rematch2-2.1.2-fcquca7kgwp56ermkpjg6qzzrl7e6haa since r-tibble-3.1.5-ejh4hbsgen5fox5ikhnyb526x2bstx6d failed
==> Warning: Skipping build of r-lattice-0.20-44-zhivmcbxm5rdy4fhq5xebw2ddplo4vo5 since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-nlme-3.1-153-s2f4avqim43a5rnkof5j7nwgia4b75kz since r-lattice-0.20-44-zhivmcbxm5rdy4fhq5xebw2ddplo4vo5 failed
==> Warning: Skipping build of r-mgcv-1.8-38-ni5mgptmm3mrrjkm67u34pbfzagbrpy6 since r-nlme-3.1-153-s2f4avqim43a5rnkof5j7nwgia4b75kz failed
==> Warning: Skipping build of r-matrix-1.3-4-r3cv3g7e4rbjpu54oxtn36fqkknlp7bj since r-lattice-0.20-44-zhivmcbxm5rdy4fhq5xebw2ddplo4vo5 failed
==> Warning: Skipping build of r-survival-3.2-7-wvcxfwxxuaw2ijylprxpyixnjjzv554q since r-matrix-1.3-4-r3cv3g7e4rbjpu54oxtn36fqkknlp7bj failed
==> Warning: Skipping build of r-r6-2.5.0-b3ar3cpb5zhsdyy6avrr4ic6hw53y7qf since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-pkgbuild-1.2.0-c44ie4zw657b76fm4ew5y6iwucbtid7k since r-r6-2.5.0-b3ar3cpb5zhsdyy6avrr4ic6hw53y7qf failed
==> Warning: Skipping build of r-pkgload-1.1.0-slxc5rmo4eljayiryt7sopppderxupg5 since r-pkgbuild-1.2.0-c44ie4zw657b76fm4ew5y6iwucbtid7k failed
==> Warning: Skipping build of r-processx-3.5.2-oaf7iwkacha73td4xivajenea3z7vgp3 since r-r6-2.5.0-b3ar3cpb5zhsdyy6avrr4ic6hw53y7qf failed
==> Warning: Skipping build of r-callr-3.7.0-npyscaeyfwpmhav5jaj4tzime3xgy6yh since r-processx-3.5.2-oaf7iwkacha73td4xivajenea3z7vgp3 failed
==> Warning: Skipping build of r-desc-1.2.0-vpdqas2zjglx43vpzldbucfd2dkxhpks since r-r6-2.5.0-b3ar3cpb5zhsdyy6avrr4ic6hw53y7qf failed
==> Warning: Skipping build of r-backports-1.2.1-o3omorjxacoirawyuxnryxjozzbzolmo since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-checkmate-2.0.0-em5okz5wzzc2r5izt55njzghgzjah3lh since r-backports-1.2.1-o3omorjxacoirawyuxnryxjozzbzolmo failed
==> Warning: Skipping build of r-gridextra-2.3-jr3rakbvlg3doauzrkh7nhqkpdn6q3cn since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-markdown-1.1-a7jfdyulaypp4ddqlyc5jx7ccmsm5eim since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-memoise-1.1.0-sd4mu7nqv6avp2ki3ksl2un7btxvxvgf since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-munsell-0.5.0-cqfcagu5rjlz24u7bshygm74ufelr6zp since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-ellipsis-0.3.2-ys75xaazpv72ln75ezgbgc7q2llj4zcj since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-pillar-1.6.4-6ef4fa2pvtclffxm4rr7rnt6i6io73ya since r-ellipsis-0.3.2-ys75xaazpv72ln75ezgbgc7q2llj4zcj failed
==> Warning: Skipping build of r-vctrs-0.3.8-zv57ofusd4xtdybberzbk3lhntsot4fc since r-ellipsis-0.3.2-ys75xaazpv72ln75ezgbgc7q2llj4zcj failed
==> Warning: Skipping build of r-blob-1.2.1-k4jwfghag5vhruqspe7v4vypflsrrr2q since r-vctrs-0.3.8-zv57ofusd4xtdybberzbk3lhntsot4fc failed
==> Warning: Skipping build of r-glue-1.4.2-paln62jixi4s5oqwx47fwvue73c4irey since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-cli-3.0.1-ga5bf2phfvjpyldd6szdlrfka56uhnf2 since r-glue-1.4.2-paln62jixi4s5oqwx47fwvue73c4irey failed
==> Warning: Skipping build of r-lifecycle-1.0.1-nkdn4avwjnsdmwrqt6crzfyjhmmo5amb since r-glue-1.4.2-paln62jixi4s5oqwx47fwvue73c4irey failed
==> Warning: Skipping build of r-base64enc-0.1-3-vloflrgdgfundd4t7c627rmfjayhzcq2 since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-htmltools-0.5.1.1-ddyttm2rorg3pnlflp37fnzewyhhahmc since r-base64enc-0.1-3-vloflrgdgfundd4t7c627rmfjayhzcq2 failed
==> Warning: Skipping build of r-htmlwidgets-1.5.3-xonnaerug3u4fwb6rcsjooinqbmycx5d since r-htmltools-0.5.1.1-ddyttm2rorg3pnlflp37fnzewyhhahmc failed
==> Warning: Skipping build of r-farver-2.1.0-fkjunclvnzkvxfd5etm6tvepcx57ky3r since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-digest-0.6.28-unosuh7jnjbxvj4ypk3d6gqj627zfgpp since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-iterators-1.0.13-flp2oiigjw3knmhezehvnnd7dfvfjcqd since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-foreach-1.5.1-efkw6cddc37vfnirmkxfxnhsj7xd6px3 since r-iterators-1.0.13-flp2oiigjw3knmhezehvnnd7dfvfjcqd failed
==> Warning: Skipping build of r-doparallel-1.0.16-g4mjhehjrpgas4fy3f6t226532wmumhw since r-foreach-1.5.1-efkw6cddc37vfnirmkxfxnhsj7xd6px3 failed
==> Warning: Skipping build of r-withr-2.4.2-zxmwovdknl4ofhk5lpug5fclb2f4uusc since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-mime-0.11-v5qd2ubzfdnz625peuyjrqgjeiqsk7z3 since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-preprocesscore-1.52.1-sdbha5ogci7sowosk3jxhcdvtavnpxbk since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-praise-1.0.0-lxspnjhd4lai3rj3g6al6o53mq7q3noj since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-evaluate-0.14-fk74fwl4dwdrn2raoalrquh2rurp57ot since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-fansi-0.5.0-6en7nrrpcogv6utw52rwgoiinpvttl5h since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-nnet-7.3-14-um5s542yu5vlazxhgiebuxsv2of3sasm since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-matrixstats-0.61.0-hejlwgzjrzlugmbbuv3vtc5bdb3kix7z since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-dynamictreecut-1.63-1-dru6dh3gjm3ch2v3ufzk6g7zrhfhvyta since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-brio-1.1.0-akvjqkvvem6wpibmq2hunyngyqb5zvji since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-dbi-1.1.0-3ijzulqcsr37zu6pham4s5ntsaehrgox since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-iranges-2.24.1-nioprmvtgwxd4dy2esrbtdxppxaa4xcz since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-highr-0.9-4legt4haobvncyv44xcxrgf56jazegbv since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-rstudioapi-0.13-jiiewy4etd5ng7osihz6oavs7zxiciav since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-biocgenerics-0.36.0-t7umcmsxli26dcatnfajusvw2iq7iwxn since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-s4vectors-0.28.1-5bxtahmit5cuxriily6em3eomlmf6pin since r-biocgenerics-0.36.0-t7umcmsxli26dcatnfajusvw2iq7iwxn failed
==> Warning: Skipping build of r-prettyunits-1.1.1-if6ino5ratxxkwgcilmqlntq6saxen3t since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-yaml-2.2.1-4ilo3z3qffri4p44rxqalgiaz36o7ziz since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-cluster-2.1.0-lokekhludgmniok4ojwtu2q3uz6qt6lx since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-data-table-1.14.2-n3wkntzloimb6eciisozcpgnsms6phcs since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-rpart-4.1-15-3uupylnwwu4ptrzswssmawgup4kldf4e since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-ps-1.5.0-vxdhmzpql2pviwbd6dlhgirfznqfrrj2 since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-mass-7.3-54-pmmwdmrvnwkbclok2ecllp5p7vtntbiu since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-assertthat-0.2.1-e5nu5yxbca742mmxe4ngsh37sgzjtbsc since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-plogr-0.2.0-vmham4mahj2tqsfnjiixqzqd2dpdnnyj since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-rprojroot-2.0.2-oqcgpihekniw4grwwm6iqngt42zx62tk since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-rlang-0.4.12-pjevktkvogcj5nieno7fpaalzkuoeqfw since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-viridislite-0.3.0-mzjnber6d5x6tff665vfg6akjnqhusha since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-magrittr-2.0.1-bagxltcrvoof2326nsd6ctk7srve727a since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-fastcluster-1.1.25-64hjc56cluq2joyujuhq5e7oze2qqjt2 since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-diffobj-0.3.3-svfcasu2pgjawwitolmqembyod6kbs5i since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-crayon-1.4.1-oebib5duroblw7btkhfazy73odikeipe since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-gtable-0.3.0-3ai2htgp6i6kzso2euokpugfkavi5mjh since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-bh-1.72.0-3-il7lwc5yielc6znge3j7mjx6ccvfc6m7 since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-codetools-0.2-18-2ofjyjdurwih4k3frtj6gbharxh56uit since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-utf8-1.1.4-2duoalfsbunwyclzgiiknq5ns6r5rned since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-colorspace-2.0-0-2awls42ciwhfkvr6ftxwwix5nkdpk7jm since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-labeling-0.4.2-p4pjxij7u3yfufbovmvg5ggveqqvh573 since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-rcpp-1.0.7-n2ruao7tr3cg6mabmekhqzwq6doyosx7 since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-jsonlite-1.7.2-4y53q37zo5zmrc7nmqo3q52hfe3l26mw since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-stringi-1.6.2-tkt6pnil4qdlrfv3txbg4g4mvifdlzhm since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-xfun-0.24-jqty4fbsro4qmzzkoddpimcmasctt6ac since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: Skipping build of r-formula-1.2-4-zhytriwiiqmvg2vywhj5pfhnpp2pymzy since r-4.1.1-eqbmww57u5e4ylih2laorzmlgirb54qd failed
==> Warning: AssertionError exception when releasing read lock for openjdk-11.0.12_7-a75f25zctkd65qs6k6k3deyegg5s7c6o:
==> Error: r-wgcna-1.69-eqmab5gzi57ufuvgthwbh3sprkzxdkwy: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).
[+] /usr (external bzip2-1.0.6-pkyqs6czmr636ktska3fpjek77reodry)
[+] /usr (external curl-7.61.1-s5ho6wv4jx7d2f2vj27fvdaok5ajslfc)
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/gnuconfig-2021-08-14-ezyvb3gy7i726n45kwb44a4vxle3if3i
[+] /vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj (external python-3.9.9-3wcip6atrybofsb566d7pjqwhl76u4dp)
[+] /usr (external ncurses-6.1-qbvus6vwvtyxe33hxq4hbpazkrpy6ctb)
[+] /usr (external pcre2-10.32-2v5oqubg7f5kjsxdijjldrqpmdiocf76)
[+] /usr (external readline-7.0-776innbqk3ca64hss3u4zvuh46f5xe4y)
[+] /usr (external xz-5.2.4-ur7otl6tq7yv3vijsn6wu2nnvot443ku)
[+] /usr (external zlib-1.2.11-o3hvygtdcp6vg3bpvsrurq4hgklwtype)
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/icu4c-67.1-hmdff6tgajfx4xdxnlafitauesya5c64


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