Failed Reason

Failed to install dependency package :
------------------------------------------------
'make' '-j16'

4 errors found in build log:
87 checking for working mmap with MAP_FIXED... yes
88 checking for working mmap with MAP_VARIABLE... no
89 checking for MAP_FILE in mmap... yes
90 checking for MAP_VARIABLE in mmap... no
91 checking for MAP_SHARED in mmap... yes
92 checking for MAP_PRIVATE in mmap... yes
>> 93 checking for MAP_FAILED in mmap... yes
94 checking for MADV_DONTNEED in madvise... yes
95 checking for MADV_WILLNEED in madvise... yes
96 checking for MADV_RANDOM in madvise... yes
97 checking for MADV_SEQUENTIAL in madvise... yes
98 checking for SHM_NORESERVE in shmget... yes
99 checking for ceil... yes

...

456 mv -f .deps/indexdb_cat-mem.Tpo .deps/indexdb_cat-mem.Po
457 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spac
k/env/fj/fcc -DHAVE_CONFIG_H -I. -I../../src -DGMAPDB=\"/vol00
03/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linu
x-rhel8-a64fx/fj-4.7.0/gmap-gsnap-2021-03-08-br3ryd2tamgwxrca3c5vcx
x4qkxr54d7/share\" -DUTILITYP=1 -O3 -fomit-frame-pointer -MT indexd
b_cat-list.o -MD -MP -MF .deps/indexdb_cat-list.Tpo -c -o indexdb_c
at-list.o `test -f 'list.c' || echo '../../src/'`list.c
458 mv -f .deps/indexdb_cat-semaphore.Tpo .deps/indexdb_cat-semaphore.P
o
459 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spac
k/env/fj/fcc -DHAVE_CONFIG_H -I. -I../../src -DGMAPDB=\"/vol00
03/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linu
x-rhel8-a64fx/fj-4.7.0/gmap-gsnap-2021-03-08-br3ryd2tamgwxrca3c5vcx
x4qkxr54d7/share\" -DUTILITYP=1 -O3 -fomit-frame-pointer -MT indexd
b_cat-filestring.o -MD -MP -MF .deps/indexdb_cat-filestring.Tpo -c
-o indexdb_cat-filestring.o `test -f 'filestring.c' || echo '../../
src/'`filestring.c
460 mv -f .deps/gmapindex-genome128_hr.Tpo .deps/gmapindex-genome128_hr
.Po
461 /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spac
k/env/fj/fcc -DHAVE_CONFIG_H -I. -I../../src -DGMAPDB=\"/vol00
03/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linu
x-rhel8-a64fx/fj-4.7.0/gmap-gsnap-2021-03-08-br3ryd2tamgwxrca3c5vcx
x4qkxr54d7/share\" -DUTILITYP=1 -O3 -fomit-frame-pointer -MT indexd
b_cat-iit-read-univ.o -MD -MP -MF .deps/indexdb_cat-iit-read-univ.T
po -c -o indexdb_cat-iit-read-univ.o `test -f 'iit-read-univ.c' ||
echo '../../src/'`iit-read-univ.c
>> 462 ../../src/bitpack64-write.c:4485:9: error: unrecognized instruction
mnemonic, did you mean: abs, asr, b, blr, br, brk, bsl, lsr, msr,
sri, str?
463 asm("bsr %1,%0" : "=r"(msb) : "r"(maxdiff));
464 ^
465 <inline asm>:1:2: note: instantiated into assembly here
466 bsr x8,x8
467 ^
>> 468 ../../src/bitpack64-write.c:4543:9: error: unrecognized instruction
mnemonic, did you mean: abs, asr, b, blr, br, brk, bsl, lsr, msr,
sri, str?
469 asm("bsr %1,%0" : "=r"(msb) : "r"(maxdiff));
470 ^
471 <inline asm>:1:2: note: instantiated into assembly here
472 bsr x8,x8
473 ^
474 6 warnings and 2 errors generated.

...

476 make[2]: *** Waiting for unfinished jobs....
477 mv -f .deps/indexdb_cat-bigendian.Tpo .deps/indexdb_cat-bigendian.P
o
478 mv -f .deps/indexdb_cat-univinterval.Tpo .deps/indexdb_cat-univinte
rval.Po
479 mv -f .deps/indexdb_cat-interval.Tpo .deps/indexdb_cat-interval.Po
480 mv -f .deps/indexdb_cat-uintlist.Tpo .deps/indexdb_cat-uintlist.Po
481 mv -f .deps/indexdb_cat-access.Tpo .deps/indexdb_cat-access.Po
>> 482 ../../src/bitpack64-access.c:2230:9: error: unrecognized instructio
n mnemonic, did you mean: abs, asr, b, blr, br, brk, bsl, lsr, msr,
sri, str?
483 asm("bsr %1,%0" : "=r"(msb) : "r"(value));
484 ^
485 <inline asm>:1:2: note: instantiated into assembly here
486 bsr x8,x8
487 ^
488 2 warnings and 1 error generated.

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-gmap-gsnap-2021-03-08-br3ryd2tamgwxrca3c5vcxx4qkxr54d7/spack-build-out.txt

==> Installing blast-plus-2.12.0-vhg47rkr4n3jc4taoboxeqgstxvpkrsi
==> No binary for blast-plus-2.12.0-vhg47rkr4n3jc4taoboxeqgstxvpkrsi found: installing from source
==> Warning: Skipping build of rnaquast-2.2.0-ds7kn3h3glj646zyg6vgiz2oj3nk5dpx since gmap-gsnap-2021-03-08-br3ryd2tamgwxrca3c5vcxx4qkxr54d7 failed
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/fd/fda3c9c9d488cad6c1880a98a236d842bcf3610e3e702af61f7a48cf0a714b88.tar.gz
==> No patches needed for blast-plus
==> blast-plus: Executing phase: 'autoreconf'
==> blast-plus: Executing phase: 'configure'
==> Error: ProcessError: Command exited with status 1:
'/vol0003/rccs-sdt/a01008/spack-stage/spack-stage-blast-plus-2.12.0-vhg47rkr4n3jc4taoboxeqgstxvpkrsi/spack-src/c++/configure' '--prefix=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/blast-plus-2.12.0-vhg47rkr4n3jc4taoboxeqgstxvpkrsi' '--with-bin-release' '--without-debug' '--with-mt' '--without-boost' '--with-dll' '--without-static' '--without-static-exe' '--with-jpeg=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/libjpeg-9d-5ch7pzpaexz2gdf6wuzxkc2v4y3egeoi' '--with-png=/usr' '--with-freetype=/usr' '--without-hdf5' '--with-z=/usr' '--with-bz2=/usr' '--with-lzo=/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/lzo-2.10-ilmm6evbqallg652set6a5oa26hhxcqh' '--with-gnutls=/usr' '--without-openssl' '--with-pcre=/usr' '--with-python=/vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj' '--with-perl=/usr'

1 error found in build log:
56 checking whether /vol0003/rccs-sdt/a01008/spack-all-test/env-2022022
5/spack/lib/spack/env/fj/fcc has an option to discard unneeded shar
ed libraries... -Wl,--as-needed
57 checking whether /vol0003/rccs-sdt/a01008/spack-all-test/env-2022022
5/spack/lib/spack/env/fj/fcc has an option to link in whole static
archives... -Wl,--whole-archive
58 checking whether _LIBCPP_VERSION is declared... no
59 checking how to enable C++ '14 features in /vol0003/rccs-sdt/a01008/
spack-all-test/env-20220225/spack/lib/spack/env/fj/case-insensitive/
FCC ... -std=gnu++14
60 checking how to enable C '11 or at least '99 features in /vol0003/rc
cs-sdt/a01008/spack-all-test/env-20220225/spack/lib/spack/env/fj/fcc
... -std=gnu11 -fgnu89-inline
61 checking for dpkg-architecture... no
>> 62 configure: error: Unable to find static libstdc++ requested by --wit
h-bin-release.

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-blast-plus-2.12.0-vhg47rkr4n3jc4taoboxeqgstxvpkrsi/spack-build-out.txt

[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pyparsing-2.4.7-svkdl2gu6r74fpeovo2dzkur2gjc52i7
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-simplejson-3.17.2-lcvfmwb2b5db6hklhxdzlyqfgshkcazy
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pip-21.1.2-lraxbrobmv3m3awsrfqfvxwklwpu52rf
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-argh-0.26.2-hk4stieig6244xh7xfm6qrxy4kg4zvjp
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-six-1.16.0-7wy35e2zjrxyks3it4qdao6wlgugjsjj
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-argcomplete-1.12.3-wn7bkx6nsnm3ga5sfbtwgzcp3duvdhwx
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pillow-8.0.0-p32fnu563iladjafky5ec5ldau4ug4x7
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-joblib-1.0.1-3kcrpimpm3kkazr5kjjv55jn5ekc4lrt
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-cppy-1.1.0-linzg2uz35ut7khvcm63bayt5nbqlr2e
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-cython-0.29.24-rmuycsh3hdsfbp3ffdahdadzgeju5kfs
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-packaging-21.0-s6cid7alqa7tw3xxefl7ekdcot2fjcgn
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-tomli-1.2.1-qxysj56clo6kspouoq4msjtem3n3lijr
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-pyfaidx-0.5.5.2-xko4p24gf5p3h27wfmx2cjc7uigoameq
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-cycler-0.10.0-iyssuq4lbtydqiwmax5gft7kl54vbthx
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-kiwisolver-1.3.2-ewoonffipal5ap3mcwl4lzxgajk66pvy
==> Installing py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh
==> No binary for py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/63/63571bb7897a584ca3249c86dd01c10bcb5fe4296e3568b2e9c1a55356b6410e.zip
==> Applied patch /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/repos/builtin/packages/py-numpy/check_executables.patch
==> py-numpy: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 1:
'/vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj/bin/python3.9' '-s' 'setup.py' '--no-user-cfg' 'build'
See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh/spack-build-out.txt

==> Warning: Skipping build of py-matplotlib-3.2.2-fjqdc74irtx7t57a7dj5y3ozfz7hlrjz since py-numpy-1.21.3-eopspnavmocj2cziofoszo4vonyhfseh failed
==> Error: rnaquast-2.2.0-ds7kn3h3glj646zyg6vgiz2oj3nk5dpx: Package was not installed
==> Error: Installation request failed. Refer to reported errors for failing package(s).
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-setuptools-scm-6.3.2-eobdhwxld3ay3ywvassepocvioqlmoyt
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-gffutils-0.10.1-lvl5rtqt5luzuwokiza3uytsueikgcll
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/py-python-dateutil-2.8.2-47xpbgpsge4zr2jarbvsyc5uofvh3srv