List of Open Source Software which can be built on Fugaku

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Spack will be used to manage open source software packages on Fugaku. Fugaku users can easily use pre-installed packages and built packages based on Spack recipes. The following list shows the results of building/compiling packages for aarch64 according to the Spack recipes. Note that the results in this list do not guarantee that each package will work properly. On the other hand, Fujitsu will provide the following packages compiled with Fujitsu compiler on Fugaku as "external" packages, of which Spack can be aware.
  • OpenJDK 11
  • Ruby 2.6.5 or later
  • Python2 2.7.15
  • Python3 3.6.8
  • Numpy 1.14.3
  • SciPy 1.0.0
  • Eclipse IDE 2019-09 R Packages
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talloc 2.3.1

Compiler Fujitsu Compiler 4.7.0
Result Dependency Error

Failed Reason

Failed to install dependency package :
------------------------------------------------
[+] /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/opt/spack/linux-rhel8-a64fx/fj-4.7.0/gnuconfig-2021-08-14-ezyvb3gy7i726n45kwb44a4vxle3if3i
[+] /vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj (external python-3.9.9-3wcip6atrybofsb566d7pjqwhl76u4dp)
==> Installing talloc-2.3.1-3ibcb3kb4o46vju32gug7hopr7fdpovt
==> No binary for talloc-2.3.1-3ibcb3kb4o46vju32gug7hopr7fdpovt found: installing from source
==> Using cached archive: /vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/var/spack/cache/_source-cache/archive/ef/ef4822d2fdafd2be8e0cabc3ec3c806ae29b8268e932c5e9a4cd5585f37f9f77.tar.gz
==> No patches needed for talloc
==> talloc: Executing phase: 'autoreconf'
==> talloc: Executing phase: 'configure'
==> talloc: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
'make' '-j16' 'V=1'

2 errors found in build log:
684 [24/29] Linking bin/default/talloc_test_magic_differs_helper
685 04:51:48 runner ['/vol0003/rccs-sdt/a01008/spack-all-test/env-20220
225/spack/lib/spack/env/fj/fcc', 'test_magic_differs_helper.c.3.o',
'-o/vol0003/rccs-sdt/a01008/spack-stage/spack-stage-talloc-2.3.1-3
ibcb3kb4o46vju32gug7hopr7fdpovt/spack-src/bin/default/talloc_test_m
agic_differs_helper', '-Wl,-rpath,/vol0003/rccs-sdt/a01008/spack-st
age/spack-stage-talloc-2.3.1-3ibcb3kb4o46vju32gug7hopr7fdpovt/spack
-src/bin/shared', '-Wl,-rpath,/vol0003/rccs-sdt/a01008/spack-stage/
spack-stage-talloc-2.3.1-3ibcb3kb4o46vju32gug7hopr7fdpovt/spack-src
/bin/shared/private', '-Wl,-Bstatic', '-Wl,-Bdynamic', '-L/vol0003/
rccs-sdt/a01008/spack-stage/spack-stage-talloc-2.3.1-3ibcb3kb4o46vj
u32gug7hopr7fdpovt/spack-src/bin/default', '-L/usr/local/lib', '-lt
alloc', '-Wl,-no-undefined']
686 [25/29] Linking bin/default/lib/replace/replace_testsuite
687 04:51:49 runner ['/vol0003/rccs-sdt/a01008/spack-all-test/env-20220
225/spack/lib/spack/env/fj/fcc', 'lib/replace/tests/main.c.4.o', 'l
ib/replace/replace.c.2.o', 'lib/replace/cwrap.c.2.o', 'lib/replace/
closefrom.c.2.o', 'lib/replace/tests/testsuite.c.3.o', 'lib/replace
/tests/strptime.c.3.o', 'lib/replace/tests/os2_delete.c.3.o', 'lib/
replace/tests/getifaddrs.c.3.o', '-o/vol0003/rccs-sdt/a01008/spack-
stage/spack-stage-talloc-2.3.1-3ibcb3kb4o46vju32gug7hopr7fdpovt/spa
ck-src/bin/default/lib/replace/replace_testsuite', '-Wl,-rpath,/vol
0003/rccs-sdt/a01008/spack-stage/spack-stage-talloc-2.3.1-3ibcb3kb4
o46vju32gug7hopr7fdpovt/spack-src/bin/shared', '-Wl,-rpath,/vol0003
/rccs-sdt/a01008/spack-stage/spack-stage-talloc-2.3.1-3ibcb3kb4o46v
ju32gug7hopr7fdpovt/spack-src/bin/shared/private', '-Wl,-Bstatic',
'-Wl,-Bdynamic', '-L/usr/local/lib', '-Wl,-no-undefined']
688 /usr/bin/ld: /vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj/lib/pytho
n3.9/config-3.9-aarch64-linux-gnu/libpython3.9.a(posixmodule.o): re
location R_AARCH64_ADR_PREL_PG_HI21 against symbol `stdout@@GLIBC_2
.17' which may bind externally can not be used when making a shared
object; recompile with -fPIC
689 /usr/bin/ld: /vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj/lib/pytho
n3.9/config-3.9-aarch64-linux-gnu/libpython3.9.a(posixmodule.o)(.te
xt+0xd14): unresolvable R_AARCH64_ADR_PREL_PG_HI21 relocation again
st symbol `stdout@@GLIBC_2.17'
>> 690 /usr/bin/ld: final link failed: Bad value
>> 691 clang-7: error: linker command failed with exit code 1 (use -v to s
ee invocation)
692
693 Waf: Leaving directory `/vol0003/rccs-sdt/a01008/spack-stage/spack-
stage-talloc-2.3.1-3ibcb3kb4o46vju32gug7hopr7fdpovt/spack-src/bin/d
efault'
694 Build failed
695 -> task in 'pytalloc-util.cpython-39-aarch64-linux-gnu' failed wit
h exit status 1:
696 {task 70368765846464: cshlib pytalloc_util.c.13.o -> libpytalloc-u
til.cpython-39-aarch64-linux-gnu.so}
697 ['/vol0003/rccs-sdt/a01008/spack-all-test/env-20220225/spack/lib/sp
ack/env/fj/fcc', '-Wl,--version-script=/vol0003/rccs-sdt/a01008/spa
ck-stage/spack-stage-talloc-2.3.1-3ibcb3kb4o46vju32gug7hopr7fdpovt/
spack-src/bin/default/pytalloc-util.cpython-39-aarch64-linux-gnu.vs
cript', '-shared', '-Wl,-h,libpytalloc-util.cpython-39-aarch64-linu
x-gnu.so.2', 'pytalloc_util.c.13.o', '-o/vol0003/rccs-sdt/a01008/sp
ack-stage/spack-stage-talloc-2.3.1-3ibcb3kb4o46vju32gug7hopr7fdpovt
/spack-src/bin/default/libpytalloc-util.cpython-39-aarch64-linux-gn
u.so', '-Wl,-rpath,/vol0003/rccs-sdt/a01008/spack-stage/spack-stage
-talloc-2.3.1-3ibcb3kb4o46vju32gug7hopr7fdpovt/spack-src/bin/shared
', '-Wl,-rpath,/vol0003/rccs-sdt/a01008/spack-stage/spack-stage-tal
loc-2.3.1-3ibcb3kb4o46vju32gug7hopr7fdpovt/spack-src/bin/shared/pri
vate', '-Wl,-Bstatic', '-Wl,-Bdynamic', '-L/vol0003/rccs-sdt/a01008
/spack-stage/spack-stage-talloc-2.3.1-3ibcb3kb4o46vju32gug7hopr7fdp
ovt/spack-src/bin/default', '-L/usr/local/lib', '-L/vol0003/rccs-sd
t/a01008/opt/python/3.9.9/fj/lib/python3.9/config-3.9-aarch64-linux
-gnu', '-L/vol0003/rccs-sdt/a01008/opt/python/3.9.9/fj/lib', '-ltal
loc', '-lpython3.9', '-lcrypt', '-lpthread', '-ldl', '-lutil', '-lm
', '-lm', '-lpython3.9', '-lcrypt', '-lpthread', '-ldl', '-lutil',
'-lm', '-lm', '-Wl,-no-undefined']

See build log for details:
/home/rccs-sdt/a01008/spack-stage/spack-stage-talloc-2.3.1-3ibcb3kb4o46vju32gug7hopr7fdpovt/spack-build-out.txt


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